ID Q9V1M1_PYRAB Unreviewed; 429 AA.
AC Q9V1M1;
DT 01-MAY-2000, integrated into UniProtKB/TrEMBL.
DT 01-MAY-2000, sequence version 1.
DT 27-MAR-2024, entry version 86.
DE SubName: Full=Transposase, IS605 OrfB family {ECO:0000313|EMBL:CCE69786.1};
DE SubName: Full=Transposon ISC1913 related orf {ECO:0000313|EMBL:CAB49328.1};
GN OrderedLocusNames=PAB2077 {ECO:0000313|EMBL:CAB49328.1};
OS Pyrococcus abyssi (strain GE5 / Orsay).
OC Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC Pyrococcus.
OX NCBI_TaxID=272844 {ECO:0000313|EMBL:CAB49328.1, ECO:0000313|Proteomes:UP000000810};
RN [1] {ECO:0000313|EMBL:CAB49328.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Orsay {ECO:0000313|EMBL:CAB49328.1};
RA Genoscope;
RL Submitted (JUL-1999) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:CAB49328.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Orsay {ECO:0000313|EMBL:CAB49328.1};
RX PubMed=10736225; DOI=10.1006/jmbi.2000.3593;
RA Gaspin C., Cavaille J., Erauso G.;
RT "Archaeal homologs of eukaryotic methylation guide small nucleolar RNAs:
RT lessons from the Pyrococcus genomes.";
RL J. Mol. Biol. 297:895-906(2000).
RN [3] {ECO:0000313|EMBL:CAB49328.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Orsay {ECO:0000313|EMBL:CAB49328.1};
RX PubMed=11381026; DOI=10.1101/gr.GR1653R;
RA Lecompte O., Ripp R., Puzos-Barbe V., Duprat S., Heilig R., Dietrich J.,
RA Thierry J.C., Poch O.;
RT "Genome evolution at the genus level: comparison of three complete genomes
RT of hyperthermophilic archaea.";
RL Genome Res. 11:981-993(2001).
RN [4] {ECO:0000313|EMBL:CAB49328.1, ECO:0000313|Proteomes:UP000000810}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=GE5 / Orsay {ECO:0000313|Proteomes:UP000000810}, and Orsay
RC {ECO:0000313|EMBL:CAB49328.1};
RX PubMed=12622808; DOI=10.1046/j.1365-2958.2003.03381.x;
RA Cohen G., Barbe V., Flament D., Galperin M., Heilig R., Ripp R.,
RA Lecompte O., Prieur D., Poch O., Quellerou J., Thierry J.C.,
RA Van der Oost J., Weissenbach J., Zivanovic Y., Forterre P.;
RT "An integrated analysis of the genome of the hyperthermophilic archaeon
RT Pyrococcus abyssi.";
RL Mol. Microbiol. 47:1495-1512(2003).
RN [5] {ECO:0000313|EMBL:CCE69786.1, ECO:0000313|Proteomes:UP000009139}
RP GENOME REANNOTATION.
RC STRAIN=GE5 {ECO:0000313|EMBL:CCE69786.1}, and GE5 / Orsay
RC {ECO:0000313|Proteomes:UP000009139};
RX PubMed=22057919; DOI=10.1007/s00284-011-0035-x;
RA Gao J., Wang J.;
RT "Re-annotation of two hyperthermophilic archaea Pyrococcus abyssi GE5 and
RT Pyrococcus furiosus DSM 3638.";
RL Curr. Microbiol. 64:118-129(2012).
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DR EMBL; AJ248284; CAB49328.1; -; Genomic_DNA.
DR EMBL; HE613800; CCE69786.1; -; Genomic_DNA.
DR PIR; A75156; A75156.
DR RefSeq; WP_010867528.1; NC_000868.1.
DR AlphaFoldDB; Q9V1M1; -.
DR STRING; 272844.PAB2077; -.
DR GeneID; 1495299; -.
DR KEGG; pab:PAB2077; -.
DR PATRIC; fig|272844.11.peg.428; -.
DR eggNOG; arCOG00679; Archaea.
DR HOGENOM; CLU_032903_17_0_2; -.
DR OrthoDB; 33505at2157; -.
DR Proteomes; UP000000810; Chromosome.
DR Proteomes; UP000009139; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR InterPro; IPR010095; Cas12f1-like_TNB.
DR NCBIfam; TIGR01766; IS200/IS605 family accessory protein TnpB-like domain; 1.
DR Pfam; PF07282; OrfB_Zn_ribbon; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125}.
FT DOMAIN 305..368
FT /note="Cas12f1-like TNB"
FT /evidence="ECO:0000259|Pfam:PF07282"
SQ SEQUENCE 429 AA; 50172 MW; B9C4CFF570B8757D CRC64;
MRVTRTVVLK SERLPKKIFK VFIELEGMYR EMLLQILPFA VQNGITSPVK LKAEKYKFLR
ELYPQLPSHY AYTVCQDAVT RAKSFLKRKR RGLAKKECPE VRSVSIWLDD HLWRAGLTFI
RIATHKGWIE VGLEGHKYYW KTVNSDWKLA SQSRVKLDKR ERRLIVFLVF YKDVREYKAK
SWIPIDVNED NVTALIDFKP VIFETNQKKI TLGYYYRRKK VQEKWDKKLG SRNGKKRRIL
GKLREKDKKR DIRNKLAKII VEEARKRNAG IVLERLPKNV PRRMLEKVSN KQLRHRIYQS
AFLGIQKAIE RKAKEYGVPV IKVNPKNSSR LCPIHNAVVK YESGRFGVCS VGGEVWHRDI
LAVWNLYLRA PQSDGSNAPS SGGLFADGSP VPLGSTATNE AIWIEKSRWL RWNSLPPTQT
NTHLYKKKR
//
