ID Q9ZT78_ARATH Unreviewed; 652 AA.
AC Q9ZT78;
DT 01-MAY-1999, integrated into UniProtKB/TrEMBL.
DT 01-MAY-1999, sequence version 1.
DT 27-MAR-2024, entry version 164.
DE SubName: Full=Ankyrin repeat family protein {ECO:0000313|EMBL:AEE82329.1};
GN OrderedLocusNames=At4g03500 {ECO:0000313|Araport:AT4G03500,
GN ECO:0000313|EMBL:AEE82329.1};
GN ORFNames=F9H3.13 {ECO:0000313|EMBL:AAD11592.1}, F9H3_13
GN {ECO:0000313|EMBL:AEE82329.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000313|EMBL:AAD11592.1};
RN [1] {ECO:0000313|EMBL:AAD11592.1}
RP NUCLEOTIDE SEQUENCE.
RA Huang E.N., Parnell L.D., de la Bastide M., Schutz K., Habermann K.,
RA Dedhia N.N., McCombie W.R.;
RT "Genomic sequence of Arabidopsis Thaliana BAC F9H3, chromosome IV, 18.8
RT cM.";
RL Submitted (JUN-1998) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:AEE82329.1, ECO:0000313|Proteomes:UP000006548}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=10617198; DOI=10.1038/47134;
RG EU;
RG CSHL and WU Arabidopsis Sequencing Project;
RA Mayer K., Schuller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA Dusterhoft A., Stiekema W., Entian K.D., Terryn N., Harris B., Ansorge W.,
RA Brandt P., Grivell L., Rieger M., Weichselgartner M., de Simone V.,
RA Obermaier B., Mache R., Muller M., Kreis M., Delseny M., Puigdomenech P.,
RA Watson M., Schmidtheini T., Reichert B., Portatelle D., Perez-Alonso M.,
RA Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H.,
RA Ridley P., Langham S.A., McCullagh B., Bilham L., Robben J.,
RA Van der Schueren J., Grymonprez B., Chuang Y.J., Vandenbussche F.,
RA Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E.,
RA Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E.,
RA Brandt A., Peters S., van Staveren M., Dirske W., Mooijman P.,
RA Klein Lankhorst R., Rose M., Hauf J., Kotter P., Berneiser S., Hempel S.,
RA Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA Gielen J., Villarroel R., De Clercq R., Van Montagu M., Rogers J.,
RA Cronin A., Quail M., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M.,
RA Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M.,
RA Benes V., Rechmann S., Borkova D., Blocker H., Scharfe M., Grimm M.,
RA Lohnert T.H., Dose S., de Haan M., Maarse A., Schafer M., Muller-Auer S.,
RA Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A.,
RA Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O.,
RA Quigley F., Clabauld G., Mundlein A., Felber R., Schnabl S., Hiller R.,
RA Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C.,
RA Montfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA Mewes H.W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA Huang E., Spiegel L., Sehkon M., Murray J., Sheet P., Cordes M.,
RA Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L., Nelson J.,
RA Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J.,
RA Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA O'Shaughnessy A., Rodriguez M., Hoffmann J., Till S., Granat S., Shohdy N.,
RA Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.,
RA Martienssen R., McCombie W.R.;
RT "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL Nature 402:769-777(1999).
RN [3] {ECO:0000313|EMBL:AAD11592.1}
RP NUCLEOTIDE SEQUENCE.
RA Parnell L.D.;
RL Submitted (MAY-1999) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:CAB77835.1}
RP NUCLEOTIDE SEQUENCE.
RA Spiegel L.A., Huang E.N., Nascimento L.U., de la Bastide M., Vil D.M.,
RA Preston R.R., Matero A., Shah R., O'Shaughnessy A., Rodriguez M.,
RA Shekher M., Schutz K., See L.H., Swaby I., Habermann K., Dedhia N.N.,
RA Mewes H.W., Lemcke K., Mayer K.F.X.;
RL Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases.
RN [5] {ECO:0000313|EMBL:CAB77835.1}
RP NUCLEOTIDE SEQUENCE.
RA EU Arabidopsis sequencing project;
RL Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases.
RN [6] {ECO:0000313|EMBL:AEE82329.1}
RP NUCLEOTIDE SEQUENCE.
RG TAIR;
RA Swarbreck D., Lamesch P., Wilks C., Huala E.;
RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN [7] {ECO:0000313|EMBL:AEE82329.1}
RP NUCLEOTIDE SEQUENCE.
RA Krishnakumar V., Cheng C.-Y., Chan A.P., Schobel S., Kim M., Ferlanti E.S.,
RA Belyaeva I., Rosen B.D., Micklem G., Miller J.R., Vaughn M., Town C.D.;
RL Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
RN [8] {ECO:0000313|Proteomes:UP000006548}
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
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DR EMBL; AF071527; AAD11592.1; -; Genomic_DNA.
DR EMBL; CP002687; AEE82329.1; -; Genomic_DNA.
DR EMBL; AL161497; CAB77835.1; -; Genomic_DNA.
DR PIR; D85044; D85044.
DR RefSeq; NP_192259.1; NM_116588.2.
DR AlphaFoldDB; Q9ZT78; -.
DR SMR; Q9ZT78; -.
DR STRING; 3702.Q9ZT78; -.
DR PaxDb; 3702-AT4G03500-1; -.
DR EnsemblPlants; AT4G03500.1; AT4G03500.1; AT4G03500.
DR GeneID; 827731; -.
DR Gramene; AT4G03500.1; AT4G03500.1; AT4G03500.
DR Araport; AT4G03500; -.
DR TAIR; AT4G03500; -.
DR eggNOG; KOG0504; Eukaryota.
DR HOGENOM; CLU_000134_36_4_1; -.
DR OrthoDB; 5476624at2759; -.
DR Proteomes; UP000006548; Chromosome 4.
DR ExpressionAtlas; Q9ZT78; baseline and differential.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 1.25.40.20; Ankyrin repeat-containing domain; 1.
DR InterPro; IPR002110; Ankyrin_rpt.
DR InterPro; IPR036770; Ankyrin_rpt-contain_sf.
DR InterPro; IPR026961; PGG_dom.
DR PANTHER; PTHR24186:SF38; ANKYRIN REPEAT FAMILY PROTEIN; 1.
DR PANTHER; PTHR24186; PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT; 1.
DR Pfam; PF00023; Ank; 1.
DR Pfam; PF12796; Ank_2; 3.
DR Pfam; PF13962; PGG; 1.
DR SMART; SM00248; ANK; 9.
DR SUPFAM; SSF48403; Ankyrin repeat; 1.
DR PROSITE; PS50297; ANK_REP_REGION; 2.
DR PROSITE; PS50088; ANK_REPEAT; 3.
PE 4: Predicted;
KW ANK repeat {ECO:0000256|ARBA:ARBA00023043, ECO:0000256|PROSITE-
KW ProRule:PRU00023}; Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000006548};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 478..499
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 519..545
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 557..583
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 589..613
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT REPEAT 101..133
FT /note="ANK"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT REPEAT 135..167
FT /note="ANK"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT REPEAT 347..379
FT /note="ANK"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT DOMAIN 473..581
FT /note="PGG"
FT /evidence="ECO:0000259|Pfam:PF13962"
SQ SEQUENCE 652 AA; 71969 MW; B6867D3E44F49A9E CRC64;
MKNESRTSEE ISKLGIFSGV GFSMGRPDVH LDRRVAENHQ AIPRNNVRST PSLDLSTLFD
ETSETKPMDP KTMAAVRAGK ENYLRSNNSY ISVAPTLVND RGNTILHLAA SSGHVSLVRY
IIQKCPGLLL KSNMMGEVAL HLAAEAGHLD VVWNLIDFIN DISCTNLPVA KRIYFAKNKN
QDTALHVALK GKHEVVASYL VSAAKSLSFV ANRDGFSPLY LAIEAGHTSL VTTMCHGTNE
LSSKVGGRSI VHAALKANRK DILDALLSKD ASLINLRDEG RTSLSFGASI GYYQGFSYLF
DKNRDKVYVS DDDGLFPTHM AAKYGHVQIL EEILKHCPEA IELLDRDGQN ILHLAAKYGK
LKVIKFILSC CKDKNKKKLI NEQDVNGNTP LHLATINWHP KVVSMFTWDH RVDLKKRNYI
GFTALDVAEE NIDSSYIVHQ RLTWMALINA GAPKSSTPIT ENLRSFKKPD GGKYKDRVNT
LMLVATLVAT MTFTAGFTLP GGYNDSFPHL GMAVLAKRTA FQVFLVCDTL AMYSSIITIV
ALIWAQLGDL SIILKAFNIA LPFLGLALTS MSIAFMAGTY VAVSHLPLLG YFVLGIGIIF
LLVLLLLLVP YVSPYAHAQP LLRHIFYYPY FLKLLAAGDN KNIVDVYTAS DE
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