ID R0H5U8_9BRAS Unreviewed; 667 AA.
AC R0H5U8;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE RecName: Full=Zinc finger PHD-type domain-containing protein {ECO:0000259|SMART:SM00249};
GN ORFNames=CARUB_v10000398mg {ECO:0000313|EMBL:EOA20120.1};
OS Capsella rubella.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.
OX NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA20120.1, ECO:0000313|Proteomes:UP000029121};
RN [1] {ECO:0000313|Proteomes:UP000029121}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX PubMed=23749190; DOI=10.1038/ng.2669;
RA Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W., Mandakova T.,
RA Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S., Brandvain Y.,
RA Coop G., Andolfatto P., Hu T.T., Blanchette M., Clark R.M., Quesneville H.,
RA Nordborg M., Gaut B.S., Lysak M.A., Jenkins J., Grimwood J., Chapman J.,
RA Prochnik S., Shu S., Rokhsar D., Schmutz J., Weigel D., Wright S.I.;
RT "The Capsella rubella genome and the genomic consequences of rapid mating
RT system evolution.";
RL Nat. Genet. 45:831-835(2013).
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DR EMBL; KB870810; EOA20120.1; -; Genomic_DNA.
DR RefSeq; XP_006287222.1; XM_006287160.1.
DR AlphaFoldDB; R0H5U8; -.
DR GeneID; 17881369; -.
DR KEGG; crb:17881369; -.
DR eggNOG; ENOG502RANS; Eukaryota.
DR OrthoDB; 979207at2759; -.
DR Proteomes; UP000029121; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR InterPro; IPR046349; C1-like_sf.
DR InterPro; IPR004146; DC1.
DR InterPro; IPR001965; Znf_PHD.
DR PANTHER; PTHR32410; CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN; 1.
DR PANTHER; PTHR32410:SF213; CYSTEINE_HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN; 1.
DR Pfam; PF03107; C1_2; 6.
DR SMART; SM00249; PHD; 4.
DR SUPFAM; SSF57889; Cysteine-rich domain; 5.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000029121};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 143..220
FT /note="Zinc finger PHD-type"
FT /evidence="ECO:0000259|SMART:SM00249"
FT DOMAIN 256..331
FT /note="Zinc finger PHD-type"
FT /evidence="ECO:0000259|SMART:SM00249"
FT DOMAIN 396..466
FT /note="Zinc finger PHD-type"
FT /evidence="ECO:0000259|SMART:SM00249"
FT DOMAIN 565..631
FT /note="Zinc finger PHD-type"
FT /evidence="ECO:0000259|SMART:SM00249"
SQ SEQUENCE 667 AA; 76124 MW; 4AE6FCD932BAE560 CRC64;
MDPSHKILPI HKYPLTISSR FVNDTCRGCN VKAPIYGGYR SNEPSSAGLF FHKECAEAPS
EILDHPSHPQ HPLNLHNSLR KPSKCNLCGK SFFSPSYRCS SECDFTVDLT CGINPLPVTI
EHPKSHHHPV VFLKEPAKPG RCQCQICKSY NRGCSYACLE CEVHFHVECV NLSQEVNHPS
HPQHPLELLV YESLDSDAEK TCLLCGERPD KVLYRCSICN FSICRFCAKD PPPLAIEHHK
THEHRLVLLS RQISFECNAC GMQGDRSPYM CIQCGFVVHR TCIDLPRVIN INRHDHRISL
THHLGVGYSK CGICRKDISQ YNGAYTCSRC PGYAAHSLCS TRKDVWDGVE LEGTPEENED
IEPFKVVGDN LIKHFSHEEH NLRLNRDDIN RDESSRCEAC VLPVYSDPIY NCEECRFILH
EKCANLPKKK RHVFSTKPFR LWPRPPRTFA SKDFRFHDVF RCKACRTKST GFRYVSDWWV
LDVRCGSRSE PVIHDGHKHP LYYERKKNHC CDACYTQIDD HLLCCDTCDF DLDLSCTDLP
KVVKHSCDDH PLSLCYGENA NGKYWCDICE AETDPSRWFY TCSDCGVTAH IKCVLGDFSR
LMPGRIINYN KVIVEVVPNN HSSRPLCAEC HSRCRAPIIL KLCDPYTGYI CSDACAVAIT
TTRRTTI
//
