ID R0HWE2_9BRAS Unreviewed; 1189 AA.
AC R0HWE2;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 27-MAR-2024, entry version 46.
DE RecName: Full=PHD-type domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=CARUB_v10012838mg {ECO:0000313|EMBL:EOA29750.1};
OS Capsella rubella.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.
OX NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA29750.1, ECO:0000313|Proteomes:UP000029121};
RN [1] {ECO:0000313|Proteomes:UP000029121}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX PubMed=23749190; DOI=10.1038/ng.2669;
RA Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W., Mandakova T.,
RA Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S., Brandvain Y.,
RA Coop G., Andolfatto P., Hu T.T., Blanchette M., Clark R.M., Quesneville H.,
RA Nordborg M., Gaut B.S., Lysak M.A., Jenkins J., Grimwood J., Chapman J.,
RA Prochnik S., Shu S., Rokhsar D., Schmutz J., Weigel D., Wright S.I.;
RT "The Capsella rubella genome and the genomic consequences of rapid mating
RT system evolution.";
RL Nat. Genet. 45:831-835(2013).
RN [2] {ECO:0000313|EMBL:EOA29750.1}
RP NUCLEOTIDE SEQUENCE.
RA Schmutz J., Prochnik S., Nordborg M., Weigel D., Rokhsar D., Wright S.;
RT "Genome sequencing of Capsella rubella.";
RL Nat. Genet. 0:0-0(2013).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; KB870807; EOA29749.1; -; Genomic_DNA.
DR EMBL; KB870807; EOA29750.1; -; Genomic_DNA.
DR RefSeq; XP_006296851.1; XM_006296789.1.
DR RefSeq; XP_006296852.1; XM_006296790.1.
DR AlphaFoldDB; R0HWE2; -.
DR STRING; 81985.R0HWE2; -.
DR GeneID; 17893734; -.
DR KEGG; crb:17893734; -.
DR eggNOG; ENOG502QTVY; Eukaryota.
DR OrthoDB; 1222616at2759; -.
DR Proteomes; UP000029121; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0016747; F:acyltransferase activity, transferring groups other than amino-acyl groups; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd15539; PHD1_AIRE; 1.
DR Gene3D; 3.40.630.30; -; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR016181; Acyl_CoA_acyltransferase.
DR InterPro; IPR000182; GNAT_dom.
DR InterPro; IPR032308; TDBD.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46309:SF7; OS04G0433900 PROTEIN; 1.
DR PANTHER; PTHR46309; PHD FINGER PROTEIN 12; 1.
DR Pfam; PF00628; PHD; 1.
DR Pfam; PF16135; TDBD; 1.
DR SMART; SM00249; PHD; 2.
DR SUPFAM; SSF55729; Acyl-CoA N-acyltransferases (Nat); 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR PROSITE; PS51186; GNAT; 1.
DR PROSITE; PS50016; ZF_PHD_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000029121};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00146}.
FT DOMAIN 727..772
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT DOMAIN 861..1025
FT /note="N-acetyltransferase"
FT /evidence="ECO:0000259|PROSITE:PS51186"
FT REGION 569..602
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1074..1152
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 569..594
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1097..1111
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1126..1140
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1189 AA; 131998 MW; B0F33C98CD190250 CRC64;
MMLGGAEIEM FGGDCFEGSY EDHKIFREVF FGTDPENTTK RCLVTGVINF ECDSTKNVNS
SLSSNNDNSV ITSGYLEGFE ASASKDGSDF NNRAKRVKLS GNKHLDVRDE KGSALNGFPN
SDIARETVPL HLVESSNSGV LTSSYLLKQS IEKGREVYLG GIVSERFKSQ NLDRSDGKEF
KAIASPVSQE SFATRMICAG ASTPHSEKQA FSLQLNNGSK VSPNELVMSQ TCLKIDPKED
PRPLLYKYAC KLLNAARWKI EKRARSGRKY LETFYISPEG RRFREFGSAW KSLGRILLAD
HKLMDTSTKK WTGINDFWSD LSLTLLDIEE NMKNINLANT RALWWSALEP FVIAVFISKQ
VGSLRRGNKV EVARNTVIDK FKKDDATCLN MISGCPESVL TLSEGSHLVC DVDASQEIHS
DLEVQTKIVR RKVSTGLERQ NIIGKEISGA DEQEVSKGVV ASKLIAEDML ESVMRKKLHR
RSKKISDIKL APLDQHDSLD SNSLDNLEGQ DKEMGSIHLI SKRSRDERLR NEKMKNSFCN
SKKGRKKARK HYSQDDDLMV SSVIRKKGKV WRSSQKKKTH KPKARTKKRN NKGGCRLLPR
STSNAENQNF QGNWSILGPR TVLSWLIATK VISRDEVIQL RDPDDDTVVK TGLVTKDGVV
CTCCNRTVSL SEFKNHAGFN QNCPCLNLFM GSGKPFASCQ LEAWSAEYRA RRTGWRSVEA
SDDDPNDDSC GVCGDGGELI CCDNCPSTFH QACLSMQMLP EGSWYCSSCT CWICSELVSD
NAERSQDFKC SQCAHKYHGI CLQGASKRRK LFPETYFCGK GCEKVYTGLS SRVGVINPSA
DGLSWSILKC FQEDGSVHSA RRIALKAECN SKLAVALSIM EESFQSMVDP RTGIDMIPHV
LYNWGSKFAR LDFDGFYTVV VEKDDVMISV ASIRVHGVTI AEMPLVATCS KYRRQGMCRI
LVAAIEEILM SLKVEKLVVA ALPSLVDTWT QGFGFKPMDD EERDALNRIN LMVFPGTILL
KKTLYESTNT NTVKGVCLSE DHSKPSNKEA DVEPGVDKAG FPMNTQIESC DQMVPAGSDE
EPAPGFPVPL GAKETEPTSE TENRSGESNA DDRPNKTTIS MGEEEGLQEE VSKFSEEGKE
MARASSTSAA LEEVSDVGVV VVNNVSDDML LCFDEQLDSD SSEEEENSE
//
