ID R0I3E0_9BRAS Unreviewed; 361 AA.
AC R0I3E0;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 24-JAN-2024, entry version 30.
DE RecName: Full=glycerophosphodiester phosphodiesterase {ECO:0000256|ARBA:ARBA00012247};
DE EC=3.1.4.46 {ECO:0000256|ARBA:ARBA00012247};
GN ORFNames=CARUB_v10014033mg {ECO:0000313|EMBL:EOA30888.1};
OS Capsella rubella.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.
OX NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA30888.1, ECO:0000313|Proteomes:UP000029121};
RN [1] {ECO:0000313|Proteomes:UP000029121}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX PubMed=23749190; DOI=10.1038/ng.2669;
RA Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W., Mandakova T.,
RA Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S., Brandvain Y.,
RA Coop G., Andolfatto P., Hu T.T., Blanchette M., Clark R.M., Quesneville H.,
RA Nordborg M., Gaut B.S., Lysak M.A., Jenkins J., Grimwood J., Chapman J.,
RA Prochnik S., Shu S., Rokhsar D., Schmutz J., Weigel D., Wright S.I.;
RT "The Capsella rubella genome and the genomic consequences of rapid mating
RT system evolution.";
RL Nat. Genet. 45:831-835(2013).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a sn-glycero-3-phosphodiester + H2O = an alcohol + H(+) + sn-
CC glycerol 3-phosphate; Xref=Rhea:RHEA:12969, ChEBI:CHEBI:15377,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:30879, ChEBI:CHEBI:57597,
CC ChEBI:CHEBI:83408; EC=3.1.4.46;
CC Evidence={ECO:0000256|ARBA:ARBA00029315};
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DR EMBL; KB870807; EOA30888.1; -; Genomic_DNA.
DR RefSeq; XP_006297990.1; XM_006297928.1.
DR AlphaFoldDB; R0I3E0; -.
DR STRING; 81985.R0I3E0; -.
DR GeneID; 17893337; -.
DR KEGG; crb:17893337; -.
DR eggNOG; KOG2421; Eukaryota.
DR OrthoDB; 1005457at2759; -.
DR Proteomes; UP000029121; Unassembled WGS sequence.
DR GO; GO:0008889; F:glycerophosphodiester phosphodiesterase activity; IEA:UniProtKB-EC.
DR GO; GO:0006071; P:glycerol metabolic process; IEA:UniProtKB-KW.
DR GO; GO:0006629; P:lipid metabolic process; IEA:InterPro.
DR Gene3D; 3.20.20.190; Phosphatidylinositol (PI) phosphodiesterase; 1.
DR InterPro; IPR030395; GP_PDE_dom.
DR InterPro; IPR017946; PLC-like_Pdiesterase_TIM-brl.
DR PANTHER; PTHR22958:SF1; GLYCEROPHOSPHOCHOLINE PHOSPHODIESTERASE GPCPD1; 1.
DR PANTHER; PTHR22958; GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE; 1.
DR Pfam; PF03009; GDPD; 1.
DR SUPFAM; SSF51695; PLC-like phosphodiesterases; 1.
DR PROSITE; PS51704; GP_PDE; 1.
PE 4: Predicted;
KW Glycerol metabolism {ECO:0000256|ARBA:ARBA00022798};
KW Reference proteome {ECO:0000313|Proteomes:UP000029121}.
FT DOMAIN 34..323
FT /note="GP-PDE"
FT /evidence="ECO:0000259|PROSITE:PS51704"
SQ SEQUENCE 361 AA; 40781 MW; 30BF43186A410E21 CRC64;
MSLKAIHVSE VPSLDHFPEN PSLLCSSRKS NNKFLVVGHR GHGMNMSQSP DLRFSALKEN
SILSFNAASK LPLDFIEFDV QVTRDGCPVI FHDDFIFSEE QGVVYEKRVT EVCLSEFMSY
GPQRQPGKTG KPLLRKSKEG KILKWTVHGE DSLCTLQEAF EKVEKPNLGF NIELKLDDNL
LYSPDHLSRL LLPILQVVSD FAKDRPIIFS SFHPDAALLV RKLQTTYPVF FLTNGGTEMY
HDARRNSLEE AIKVCLEGGL QGIVSEVKGI FRSPAAVYKI KESKLSLMTY GKLNNVAEAV
YMQHLMGIEG VIVDHVEEIT EAVREMMKPS SRDVDDTKPK PNFSERELSF LLKLIPELIQ
H
//
