ID R0I3T1_9BRAS Unreviewed; 875 AA.
AC R0I3T1;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 24-JAN-2024, entry version 42.
DE RecName: Full=SWIRM domain-containing protein {ECO:0000259|PROSITE:PS50934};
GN ORFNames=CARUB_v10015899mg {ECO:0000313|EMBL:EOA32605.1};
OS Capsella rubella.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.
OX NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA32605.1, ECO:0000313|Proteomes:UP000029121};
RN [1] {ECO:0000313|Proteomes:UP000029121}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX PubMed=23749190; DOI=10.1038/ng.2669;
RA Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W., Mandakova T.,
RA Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S., Brandvain Y.,
RA Coop G., Andolfatto P., Hu T.T., Blanchette M., Clark R.M., Quesneville H.,
RA Nordborg M., Gaut B.S., Lysak M.A., Jenkins J., Grimwood J., Chapman J.,
RA Prochnik S., Shu S., Rokhsar D., Schmutz J., Weigel D., Wright S.I.;
RT "The Capsella rubella genome and the genomic consequences of rapid mating
RT system evolution.";
RL Nat. Genet. 45:831-835(2013).
CC -!- SIMILARITY: Belongs to the flavin monoamine oxidase family.
CC {ECO:0000256|ARBA:ARBA00005995}.
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DR EMBL; KB870807; EOA32605.1; -; Genomic_DNA.
DR RefSeq; XP_006299707.1; XM_006299645.1.
DR AlphaFoldDB; R0I3T1; -.
DR STRING; 81985.R0I3T1; -.
DR GeneID; 17892384; -.
DR KEGG; crb:17892384; -.
DR eggNOG; KOG0029; Eukaryota.
DR OrthoDB; 5402444at2759; -.
DR Proteomes; UP000029121; Unassembled WGS sequence.
DR GO; GO:0016491; F:oxidoreductase activity; IEA:InterPro.
DR GO; GO:0006325; P:chromatin organization; IEA:UniProtKB-KW.
DR Gene3D; 3.90.660.10; -; 1.
DR Gene3D; 3.50.50.60; FAD/NAD(P)-binding domain; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR002937; Amino_oxidase.
DR InterPro; IPR036188; FAD/NAD-bd_sf.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR007526; SWIRM.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR10742; FLAVIN MONOAMINE OXIDASE; 1.
DR PANTHER; PTHR10742:SF260; PROTEIN FLOWERING LOCUS D; 1.
DR Pfam; PF01593; Amino_oxidase; 1.
DR Pfam; PF04433; SWIRM; 1.
DR SUPFAM; SSF54373; FAD-linked reductases, C-terminal domain; 1.
DR SUPFAM; SSF51905; FAD/NAD(P)-binding domain; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS50934; SWIRM; 1.
PE 3: Inferred from homology;
KW Chromatin regulator {ECO:0000256|ARBA:ARBA00022853};
KW Reference proteome {ECO:0000313|Proteomes:UP000029121}.
FT DOMAIN 69..170
FT /note="SWIRM"
FT /evidence="ECO:0000259|PROSITE:PS50934"
FT REGION 1..24
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 766..787
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 819..875
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 768..782
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 819..866
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 875 AA; 95206 MW; 6907A6B887B3259D CRC64;
MVSFSAPKKR RRGRSQRSAS SFHTLPVPGN SNFVSSSASS SGRFNVEVNL SNQTVKNYPG
IGDEIITINK EATTEALLAL TAGFPADSLT EEEIEFGVVP VVGGIEQVNY ILIRNHIISK
WRENISSWVT KEMFLNSIPK HCSSLLDSAY NYLVTHGYIN FGIAQAIKDK IPAQSSKSNV
VIVGAGLSGL AAARQLIRFG YKVTVLEGRK RPGGRVYTKK MEASRLGAAA DLGGSVLTGT
LGNPLGIIAR QLGSSLYKVR DKCPLYRVDG KPVDPDVDMK VEVAFNQLLD KASKLRQLMG
DVSMDVSLGA ALETFRQVSG NDVATEEMGL FNWHLANLEY ANAGLVSKLS LAFWDQDDPY
DMGGDHCFLP GGNGRLVQAL AENVPILYDK TVQTIRYGSN GVKVIAGNQV YEGDMVLCTV
PLGVLKNGSI KFVPELPQRK LDCIKRLGFG LLNKVAMLFP HVFWSTDLDT FGHLTEDPNY
RGEFFLFYSY APVAGGPLLI ALVAGEAAHK FETMPPTDAV TRVLQILRGI YEPQGITVPD
PLQTVCTRWG GDPFSLGSYS NVAVGASGDD YDILAESVGD GRLFFAGEAT TRRYPATMHG
AFVTGLREAA NMAQFAKARG IRKRIDRNPS RNAHSCAILL ADLFRDPDLE FGGFSIIFSR
RNPDPKSPAI LRVTLSEPRK RNEDPKADQH SNKILFQQLQ SHFNQQQQIQ VYTLLTRQQA
LDLREVRGGD EKRLYYLCET LGVKLVGRKG LGTGADLVIA SIKAERTGRK LPSSSSSGSK
SGILKGKPGA LKRKMIRRIK GPLPLKQSNN GISETIRSES LGNGKASEQQ QQQQPTIVES
IGGSSMQGES KMLGTGVATS SGGSLLGETM KKMEE
//
