GenomeNet

Database: UniProt
Entry: R0J9A8_ANAPL
LinkDB: R0J9A8_ANAPL
Original site: R0J9A8_ANAPL 
ID   R0J9A8_ANAPL            Unreviewed;       455 AA.
AC   R0J9A8;
DT   26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT   26-JUN-2013, sequence version 1.
DT   22-FEB-2023, entry version 28.
DE   SubName: Full=Keratin, type II cytoskeletal 6A {ECO:0000313|EMBL:EOA93541.1};
DE   Flags: Fragment;
GN   ORFNames=Anapl_07540 {ECO:0000313|EMBL:EOA93541.1};
OS   Anas platyrhynchos (Mallard) (Anas boschas).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC   Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae;
OC   Anatinae; Anas.
OX   NCBI_TaxID=8839 {ECO:0000313|EMBL:EOA93541.1, ECO:0000313|Proteomes:UP000296049};
RN   [1] {ECO:0000313|Proteomes:UP000296049}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=23749191; DOI=10.1038/ng.2657;
RA   Huang Y., Li Y., Burt D.W., Chen H., Zhang Y., Qian W., Kim H., Gan S.,
RA   Zhao Y., Li J., Yi K., Feng H., Zhu P., Li B., Liu Q., Fairley S.,
RA   Magor K.E., Du Z., Hu X., Goodman L., Tafer H., Vignal A., Lee T.,
RA   Kim K.W., Sheng Z., An Y., Searle S., Herrero J., Groenen M.A.,
RA   Crooijmans R.P., Faraut T., Cai Q., Webster R.G., Aldridge J.R.,
RA   Warren W.C., Bartschat S., Kehr S., Marz M., Stadler P.F., Smith J.,
RA   Kraus R.H., Zhao Y., Ren L., Fei J., Morisson M., Kaiser P., Griffin D.K.,
RA   Rao M., Pitel F., Wang J., Li N.;
RT   "The duck genome and transcriptome provide insight into an avian influenza
RT   virus reservoir species.";
RL   Nat. Genet. 45:776-783(2013).
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DR   EMBL; KB746064; EOA93541.1; -; Genomic_DNA.
DR   AlphaFoldDB; R0J9A8; -.
DR   Proteomes; UP000296049; Unassembled WGS sequence.
DR   GO; GO:0045095; C:keratin filament; IEA:InterPro.
DR   Gene3D; 1.20.5.170; -; 1.
DR   Gene3D; 1.20.5.500; Single helix bin; 1.
DR   Gene3D; 1.20.5.1160; Vasodilator-stimulated phosphoprotein; 1.
DR   InterPro; IPR039008; IF_rod_dom.
DR   InterPro; IPR032444; Keratin_2_head.
DR   InterPro; IPR003054; Keratin_II.
DR   PANTHER; PTHR45616; GATA-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR45616:SF34; IF ROD DOMAIN-CONTAINING PROTEIN; 1.
DR   Pfam; PF00038; Filament; 1.
DR   Pfam; PF16208; Keratin_2_head; 1.
DR   PRINTS; PR01276; TYPE2KERATIN.
DR   SMART; SM01391; Filament; 1.
DR   SUPFAM; SSF64593; Intermediate filament protein, coiled coil region; 3.
DR   PROSITE; PS51842; IF_ROD_2; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW   Intermediate filament {ECO:0000256|ARBA:ARBA00022754};
KW   Reference proteome {ECO:0000313|Proteomes:UP000296049}.
FT   DOMAIN          145..455
FT                   /note="IF rod"
FT                   /evidence="ECO:0000259|PROSITE:PS51842"
FT   COILED          142..169
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          200..248
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          354..434
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   NON_TER         455
FT                   /evidence="ECO:0000313|EMBL:EOA93541.1"
SQ   SEQUENCE   455 AA;  50535 MW;  93FC0C7EA7D0DBA1 CRC64;
     MSRQSVCRSF GGGSRRGYSS CSAIGGGFGG GGGRSRSSYS SFSMSRGYGG GGRCGGFGSR
     SLHNMGGSGR IAIGMGGFGG GMGGYGGGMG GGGMGGFGGP GFGMHGFGGP GRGGPGIQPV
     QVDSSLLRPV HVEIDPQIQQ VKNQEKEQIK TLNNQFASFI DKVRFLEQQN KVLSTKWELL
     QQQGPSGPRK NLDVLFENYI QNLKRQLESI LAQRGQLESE LQNMQQYVED YKTKYEEEIN
     RRTAAENEFV VLKKDCAYMT KVELEAKVGA LTDEINFLRC IYEEELSQMQ TISRDLSVVV
     SMDNNRHLDL DSIIEEVRRQ YEQIAQSSRA EAEAWYQSQY EQLQSTAGMH GDSLRNTKIE
     IQELTRNIQR LRAEIENVKK QNQQLQAAIA EAEERGEMAL KDARTKLEEL ECALNKDKEE
     LARLLKEYQE LLNIKIALDV EIAMYRKLLE GEENR
//
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