ID R0KCG2_ANAPL Unreviewed; 431 AA.
AC R0KCG2;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 27-MAR-2024, entry version 66.
DE RecName: Full=Cleavage stimulation factor 50 kDa subunit {ECO:0000256|ARBA:ARBA00029851};
DE Flags: Fragment;
GN ORFNames=Anapl_00282 {ECO:0000313|EMBL:EOB08056.1};
OS Anas platyrhynchos (Mallard) (Anas boschas).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae;
OC Anatinae; Anas.
OX NCBI_TaxID=8839 {ECO:0000313|EMBL:EOB08056.1, ECO:0000313|Proteomes:UP000296049};
RN [1] {ECO:0000313|EMBL:EOB08056.1}
RP NUCLEOTIDE SEQUENCE.
RA Li N.;
RT "The genome sequence and transcriptome of duck provide insight into the
RT interaction host.";
RL Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000296049}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23749191; DOI=10.1038/ng.2657;
RA Huang Y., Li Y., Burt D.W., Chen H., Zhang Y., Qian W., Kim H., Gan S.,
RA Zhao Y., Li J., Yi K., Feng H., Zhu P., Li B., Liu Q., Fairley S.,
RA Magor K.E., Du Z., Hu X., Goodman L., Tafer H., Vignal A., Lee T.,
RA Kim K.W., Sheng Z., An Y., Searle S., Herrero J., Groenen M.A.,
RA Crooijmans R.P., Faraut T., Cai Q., Webster R.G., Aldridge J.R.,
RA Warren W.C., Bartschat S., Kehr S., Marz M., Stadler P.F., Smith J.,
RA Kraus R.H., Zhao Y., Ren L., Fei J., Morisson M., Kaiser P., Griffin D.K.,
RA Rao M., Pitel F., Wang J., Li N.;
RT "The duck genome and transcriptome provide insight into an avian influenza
RT virus reservoir species.";
RL Nat. Genet. 45:776-783(2013).
RN [3] {ECO:0000313|Ensembl:ENSAPLP00020023188.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (SEP-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; KB742479; EOB08056.1; -; Genomic_DNA.
DR RefSeq; XP_005010474.1; XM_005010417.2.
DR Ensembl; ENSAPLT00020025034.1; ENSAPLP00020023188.1; ENSAPLG00020016118.1.
DR HOGENOM; CLU_041619_0_0_1; -.
DR OMA; HTEDYVM; -.
DR Proteomes; UP000296049; Unassembled WGS sequence.
DR Proteomes; UP000694400; Chromosome 16.
DR GO; GO:0005848; C:mRNA cleavage stimulating factor complex; IEA:InterPro.
DR GO; GO:0031124; P:mRNA 3'-end processing; IEA:InterPro.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 1.20.960.50; Cleavage stimulation factor subunit 1, dimerisation domain; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR044633; CstF1-like.
DR InterPro; IPR032028; CSTF1_dimer.
DR InterPro; IPR038184; CSTF1_dimer_sf.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR44133; CLEAVAGE STIMULATION FACTOR SUBUNIT 1; 1.
DR PANTHER; PTHR44133:SF2; CLEAVAGE STIMULATION FACTOR SUBUNIT 1; 1.
DR Pfam; PF16699; CSTF1_dimer; 1.
DR Pfam; PF00400; WD40; 6.
DR SMART; SM00320; WD40; 6.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 4.
DR PROSITE; PS50294; WD_REPEATS_REGION; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000296049};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT DOMAIN 7..60
FT /note="Cleavage stimulation factor subunit 1 dimerisation"
FT /evidence="ECO:0000259|Pfam:PF16699"
FT REPEAT 104..138
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 169..210
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 258..299
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 309..343
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT NON_TER 431
FT /evidence="ECO:0000313|EMBL:EOB08056.1"
SQ SEQUENCE 431 AA; 48346 MW; 9A045AE843789374 CRC64;
MYRTKVSLKD RQQLYKLIIS QLLYDGYINI ANGLINEIKP QSVCAPSEQL LHLIKLGMEN
DDSAVQYAIG RSDTVAPGTG IDLEFDADVQ TMSPEASEYE TCYVTSHKGP CRVATYSRDG
QLIATGSADA SIKILDTERM LAKSAMPIEV MMNETAQQNM ENHPVIRTLY DHVDEVTCLA
FHPTEQILAS GSRDYTLKLF DYSKPSAKRA FKYIQEAEML RSISFHPSGD FILVGTQHPT
LRLYDINTFQ CFVSCNPQDQ HTDAICSVNY NASANMYVTG SKDGCIKLWD GVSNRCITTF
EKAHDGAEVC SAIFSKNSKY ILSSGKDSVA KLWEISTGRT LVKYTGAGLS GRQVHRTQAV
FNHTEDYVLL PDERTISLCC WDSRTAERRN LLSLGHNSIV RCIVHSPTNP GFMTCSDDYR
ARFWYRRSTT D
//
