ID R1DB62_EMIHU Unreviewed; 731 AA.
AC R1DB62;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 27-MAR-2024, entry version 49.
DE RecName: Full=MAM domain-containing protein {ECO:0000259|PROSITE:PS50060};
DE Flags: Fragment;
GN ORFNames=EMIHUDRAFT_253292 {ECO:0000313|EMBL:EOD32673.1};
OS Emiliania huxleyi (Coccolithophore) (Pontosphaera huxleyi).
OC Eukaryota; Haptista; Haptophyta; Prymnesiophyceae; Isochrysidales;
OC Noelaerhabdaceae; Emiliania.
OX NCBI_TaxID=2903 {ECO:0000313|EMBL:EOD32673.1};
RN [1] {ECO:0000313|EMBL:EOD32673.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CCMP1516 {ECO:0000313|EMBL:EOD32673.1};
RG DOE Joint Genome Institute;
RA Read B., Kegel J., Klute M., Kuo A., Lefebvre S.C., Maumus F., Mayer C.,
RA Miller J., Allen A., Bidle K., Borodovsky M., Bowler C., Brownlee C.,
RA Claverie J.-M., Cock M., De Vargas C., Elias M., Frickenhaus S.,
RA Gladyshev V.N., Gonzalez K., Guda C., Hadaegh A., Herman E.,
RA Iglesias-Rodriguez D., Jones B., Lawson T., Leese F., Lin Y.-C.,
RA Lindquist E., Lobanov A., Lucas S., Malik S.-H.B., Marsh M.E., Mock T.,
RA Monier A., Moreau H., Mueller-Roeber B., Napier J., Ogata H., Parker M.,
RA Probert I., Quesneville H., Raines C., Rensing S., Riano-Pachon D.M.,
RA Richier S., Rokitta S., Salamov A., Sarno A.F., Schmutz J., Schroeder D.,
RA Shiraiwa Y., Soanes D.M., Valentin K., Van Der Giezen M., Van Der Peer Y.,
RA Vardi A., Verret F., Von Dassow P., Wheeler G., Williams B., Wilson W.,
RA Wolfe G., Wurch L.L., Young J., Dacks J.B., Delwiche C.F., Dyhrman S.,
RA Glockner G., John U., Richards T., Worden A.Z., Zhang X., Grigoriev I.V.;
RT "Genome variability drives Emilianias global distribution.";
RL Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000013827}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CCMP1516 {ECO:0000313|Proteomes:UP000013827};
RX PubMed=23760476; DOI=10.1038/nature12221;
RA Read B.A., Kegel J., Klute M.J., Kuo A., Lefebvre S.C., Maumus F.,
RA Mayer C., Miller J., Monier A., Salamov A., Young J., Aguilar M.,
RA Claverie J.M., Frickenhaus S., Gonzalez K., Herman E.K., Lin Y.C.,
RA Napier J., Ogata H., Sarno A.F., Shmutz J., Schroeder D., de Vargas C.,
RA Verret F., von Dassow P., Valentin K., Van de Peer Y., Wheeler G.,
RA Dacks J.B., Delwiche C.F., Dyhrman S.T., Glockner G., John U., Richards T.,
RA Worden A.Z., Zhang X., Grigoriev I.V., Allen A.E., Bidle K., Borodovsky M.,
RA Bowler C., Brownlee C., Cock J.M., Elias M., Gladyshev V.N., Groth M.,
RA Guda C., Hadaegh A., Iglesias-Rodriguez M.D., Jenkins J., Jones B.M.,
RA Lawson T., Leese F., Lindquist E., Lobanov A., Lomsadze A., Malik S.B.,
RA Marsh M.E., Mackinder L., Mock T., Mueller-Roeber B., Pagarete A.,
RA Parker M., Probert I., Quesneville H., Raines C., Rensing S.A.,
RA Riano-Pachon D.M., Richier S., Rokitta S., Shiraiwa Y., Soanes D.M.,
RA van der Giezen M., Wahlund T.M., Williams B., Wilson W., Wolfe G.,
RA Wurch L.L.;
RT "Pan genome of the phytoplankton Emiliania underpins its global
RT distribution.";
RL Nature 499:209-213(2013).
RN [3] {ECO:0000313|EnsemblProtists:EOD32673}
RP IDENTIFICATION.
RG EnsemblProtists;
RL Submitted (NOV-2023) to UniProtKB.
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DR EMBL; KB864501; EOD32673.1; -; Genomic_DNA.
DR RefSeq; XP_005785102.1; XM_005785045.1.
DR PaxDb; 2903-EOD32673; -.
DR EnsemblProtists; EOD32673; EOD32673; EMIHUDRAFT_253292.
DR GeneID; 17277947; -.
DR KEGG; ehx:EMIHUDRAFT_253292; -.
DR eggNOG; KOG3627; Eukaryota.
DR HOGENOM; CLU_379304_0_0_1; -.
DR Proteomes; UP000013827; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd06263; MAM; 2.
DR Gene3D; 2.60.120.200; -; 2.
DR InterPro; IPR013320; ConA-like_dom_sf.
DR InterPro; IPR000998; MAM_dom.
DR InterPro; IPR011050; Pectin_lyase_fold/virulence.
DR PANTHER; PTHR23282; APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR; 1.
DR PANTHER; PTHR23282:SF101; RT07201P-RELATED; 1.
DR Pfam; PF00629; MAM; 2.
DR SMART; SM00137; MAM; 2.
DR SUPFAM; SSF49899; Concanavalin A-like lectins/glucanases; 2.
DR SUPFAM; SSF51126; Pectin lyase-like; 1.
DR PROSITE; PS50060; MAM_2; 2.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000013827};
KW Signal {ECO:0000256|SAM:SignalP}; Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT SIGNAL 1..22
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 23..731
FT /note="MAM domain-containing protein"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5014591046"
FT TRANSMEM 56..78
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 213..365
FT /note="MAM"
FT /evidence="ECO:0000259|PROSITE:PS50060"
FT DOMAIN 389..547
FT /note="MAM"
FT /evidence="ECO:0000259|PROSITE:PS50060"
FT NON_TER 731
FT /evidence="ECO:0000313|EMBL:EOD32673.1"
SQ SEQUENCE 731 AA; 77231 MW; E26CECDBE0F8F55E CRC64;
MGALMGCLGV SVVALSWRGS TASKTGPDKV QKRSRLAKKI EDMAMAGSTG VCRTQIFFYF
FCFVAMVGLC GVTFEAFVVR YTRGRGAAGK ARRLVETGLA GAGALRLGRV ASLEPSRSAA
QVRVAAAALL VGRVAASATD PSGELLPSAA ALSPEPPHHG RKLSHCEASG LCGYCSACPT
CSGVGGSCSS CCPQRSPPPP SPTPPLLPDM VQLGCDFEVD TCIWNDTAPD GYTWTRTSGG
TPSPGTGPSG DHTTGSGYHI FTEATGTYNK LHRLESPRFS LQQDATLSFF YHMYDSYSSD
MGTLSVETYN NETGWSTLWS RNGNQGNSWL DAAVILPAST TQVRFNGETG PGWSSDMALD
DVSFSQFAPP SLPPLPPSPP PLLPDMVQLS CDFEGDMCVW NDTAPDGYTW TRTSGGTPSP
GTGPSGDHTT GSGYYIFTEA TGTYNKLHRL ESPRFSLQQD ATLSFFYHMY DAYSSDMGTL
SVETYNNETG WSTLWSRNGN QGNSWLDAAV ILPASTTQVR FNGETGPGWS SDMALDDAKL
RSLIAEAAVS QADVSIYLPP RADFKLGSHI SCGSDINVTV ASSGEGATLD GQEQTRLFYL
SGGCSLTLRG LTLVNGRTSI YGGVVYADGA GDVEIIESTN GGVVYASSSG AVSIIDSTVR
DCSAVSVRRV ELAALQRLTA VGREMKRVHG CLTPLSSQPQ SGGVVYADQN SGVVSIIDSD
VRDCSAGNVR R
//
