ID R1FWR4_EMIHU Unreviewed; 881 AA.
AC R1FWR4;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 27-MAR-2024, entry version 52.
DE RecName: Full=Receptor ligand binding region domain-containing protein {ECO:0000259|Pfam:PF01094};
DE Flags: Fragment;
GN ORFNames=EMIHUDRAFT_466586 {ECO:0000313|EMBL:EOD40166.1};
OS Emiliania huxleyi (Coccolithophore) (Pontosphaera huxleyi).
OC Eukaryota; Haptista; Haptophyta; Prymnesiophyceae; Isochrysidales;
OC Noelaerhabdaceae; Emiliania.
OX NCBI_TaxID=2903 {ECO:0000313|EMBL:EOD40166.1};
RN [1] {ECO:0000313|EMBL:EOD40166.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CCMP1516 {ECO:0000313|EMBL:EOD40166.1};
RG DOE Joint Genome Institute;
RA Read B., Kegel J., Klute M., Kuo A., Lefebvre S.C., Maumus F., Mayer C.,
RA Miller J., Allen A., Bidle K., Borodovsky M., Bowler C., Brownlee C.,
RA Claverie J.-M., Cock M., De Vargas C., Elias M., Frickenhaus S.,
RA Gladyshev V.N., Gonzalez K., Guda C., Hadaegh A., Herman E.,
RA Iglesias-Rodriguez D., Jones B., Lawson T., Leese F., Lin Y.-C.,
RA Lindquist E., Lobanov A., Lucas S., Malik S.-H.B., Marsh M.E., Mock T.,
RA Monier A., Moreau H., Mueller-Roeber B., Napier J., Ogata H., Parker M.,
RA Probert I., Quesneville H., Raines C., Rensing S., Riano-Pachon D.M.,
RA Richier S., Rokitta S., Salamov A., Sarno A.F., Schmutz J., Schroeder D.,
RA Shiraiwa Y., Soanes D.M., Valentin K., Van Der Giezen M., Van Der Peer Y.,
RA Vardi A., Verret F., Von Dassow P., Wheeler G., Williams B., Wilson W.,
RA Wolfe G., Wurch L.L., Young J., Dacks J.B., Delwiche C.F., Dyhrman S.,
RA Glockner G., John U., Richards T., Worden A.Z., Zhang X., Grigoriev I.V.;
RT "Genome variability drives Emilianias global distribution.";
RL Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000013827}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CCMP1516 {ECO:0000313|Proteomes:UP000013827};
RX PubMed=23760476; DOI=10.1038/nature12221;
RA Read B.A., Kegel J., Klute M.J., Kuo A., Lefebvre S.C., Maumus F.,
RA Mayer C., Miller J., Monier A., Salamov A., Young J., Aguilar M.,
RA Claverie J.M., Frickenhaus S., Gonzalez K., Herman E.K., Lin Y.C.,
RA Napier J., Ogata H., Sarno A.F., Shmutz J., Schroeder D., de Vargas C.,
RA Verret F., von Dassow P., Valentin K., Van de Peer Y., Wheeler G.,
RA Dacks J.B., Delwiche C.F., Dyhrman S.T., Glockner G., John U., Richards T.,
RA Worden A.Z., Zhang X., Grigoriev I.V., Allen A.E., Bidle K., Borodovsky M.,
RA Bowler C., Brownlee C., Cock J.M., Elias M., Gladyshev V.N., Groth M.,
RA Guda C., Hadaegh A., Iglesias-Rodriguez M.D., Jenkins J., Jones B.M.,
RA Lawson T., Leese F., Lindquist E., Lobanov A., Lomsadze A., Malik S.B.,
RA Marsh M.E., Mackinder L., Mock T., Mueller-Roeber B., Pagarete A.,
RA Parker M., Probert I., Quesneville H., Raines C., Rensing S.A.,
RA Riano-Pachon D.M., Richier S., Rokitta S., Shiraiwa Y., Soanes D.M.,
RA van der Giezen M., Wahlund T.M., Williams B., Wilson W., Wolfe G.,
RA Wurch L.L.;
RT "Pan genome of the phytoplankton Emiliania underpins its global
RT distribution.";
RL Nature 499:209-213(2013).
RN [3] {ECO:0000313|EnsemblProtists:EOD40166}
RP IDENTIFICATION.
RG EnsemblProtists;
RL Submitted (NOV-2023) to UniProtKB.
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DR EMBL; KB863454; EOD40166.1; -; Genomic_DNA.
DR RefSeq; XP_005792595.1; XM_005792538.1.
DR STRING; 2903.R1FWR4; -.
DR PaxDb; 2903-EOD40166; -.
DR EnsemblProtists; EOD40166; EOD40166; EMIHUDRAFT_466586.
DR GeneID; 17285437; -.
DR KEGG; ehx:EMIHUDRAFT_466586; -.
DR eggNOG; KOG1052; Eukaryota.
DR HOGENOM; CLU_326915_0_0_1; -.
DR Proteomes; UP000013827; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 3.40.50.2300; -; 2.
DR InterPro; IPR001828; ANF_lig-bd_rcpt.
DR InterPro; IPR028082; Peripla_BP_I.
DR PANTHER; PTHR30483; LEUCINE-SPECIFIC-BINDING PROTEIN; 1.
DR PANTHER; PTHR30483:SF6; PERIPLASMIC BINDING PROTEIN OF ABC TRANSPORTER FOR NATURAL AMINO ACIDS; 1.
DR Pfam; PF01094; ANF_receptor; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000013827};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 461..486
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 64..380
FT /note="Receptor ligand binding region"
FT /evidence="ECO:0000259|Pfam:PF01094"
FT REGION 783..822
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:EOD40166.1"
SQ SEQUENCE 881 AA; 93964 MW; FDCCF1055FA911A2 CRC64;
MSERCFTAPD LHKIGVLMPL TDNGDPQHWK AMACAALLAV AHFNARDGSV VPAFSQSSGV
SSLAFNLSAR LYDTAYTPNG AVEAFRVAQD AGSAGLVGPY RSASSISLYP RGDFLDLPLV
SYGSTSVVLS NKPAFSRTVP TDEDSAAVVV SAIGGFGWRN FNIVHVNDAW GSPYAQLIAA
RAAACGLNPP LKIKFEYDDE QSAREAVRTL SKQPQTIVVL LAFVNDLPGI FNEADALGLL
SGSHAWIGSR SFSPASVNAL VDAGRISNTT RDKLEGMLQA GHAPNTESFG LFKQSFARLS
PKECEAMDPQ LGGMEPSTFA DPPENTAYAF DATATVALAL REQREGNLTS ANLSTAELLR
RVSFEGASGA VSFGGEGHGA GDRNVASLSS ELRSWRQEDG AGELDYVPLP LEAGANPCFA
TLSPEAAAGM VWLGGGSTPP RDAILVAEEE ERRRRDEAQA LVWKLCVGVG VPGLLLLACG
VALLFYSFRL QSRRKQLLWR HSRLPLRFSH TAPGGKYHLF LSHTWLSGQD QALHRGPAAA
VQHAGPSTRL LPPLPRQVHL IKRRLSTLAP GMDIFLDVDN LQEFGSLADE ARRDCPEAIR
DEIFGTSRPV VSWQRSDAFQ QVALKRIVAE ALLAWTRGLW HSSRASGEEA AAGGRLGGGK
GGRGGISGIS LGSDALYLHT EARLAARLQG GRLVLAFSRH NPGAREIALE VASLVAGCSA
AEWPLAGPLD GRVVPLLLLD ATTFGGDCGE DLADDVRQWC AQVAASREPP QEECSAVALR
PSFSSSLGGS SRRSGGGRAA SPKRRNSLSR RPSLSRLPSL SCARGPEGGC PFEEVMQRTP
TDLVHASLFT QIALPWFEQP DFRKAALVAL SQELDQRSLA A
//
