ID R5YW85_9FIRM Unreviewed; 661 AA.
AC R5YW85;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 26.
DE SubName: Full=Penicillin-binding protein transpeptidase domain protein {ECO:0000313|EMBL:CDA28834.1};
GN ORFNames=BN504_00378 {ECO:0000313|EMBL:CDA28834.1};
OS Eubacterium sp. CAG:156.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Eubacteriaceae;
OC Eubacterium.
OX NCBI_TaxID=1262880 {ECO:0000313|EMBL:CDA28834.1, ECO:0000313|Proteomes:UP000018124};
RN [1] {ECO:0000313|EMBL:CDA28834.1, ECO:0000313|Proteomes:UP000018124}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:156 {ECO:0000313|Proteomes:UP000018124};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the transpeptidase family.
CC {ECO:0000256|ARBA:ARBA00007171}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDA28834.1}.
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DR EMBL; CBBN010000057; CDA28834.1; -; Genomic_DNA.
DR AlphaFoldDB; R5YW85; -.
DR STRING; 1262880.BN504_00378; -.
DR Proteomes; UP000018124; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0008658; F:penicillin binding; IEA:InterPro.
DR Gene3D; 3.40.710.10; DD-peptidase/beta-lactamase superfamily; 1.
DR Gene3D; 3.90.1310.10; Penicillin-binding protein 2a (Domain 2); 1.
DR InterPro; IPR012338; Beta-lactam/transpept-like.
DR InterPro; IPR005311; PBP_dimer.
DR InterPro; IPR036138; PBP_dimer_sf.
DR InterPro; IPR001460; PCN-bd_Tpept.
DR PANTHER; PTHR30627; PEPTIDOGLYCAN D,D-TRANSPEPTIDASE; 1.
DR PANTHER; PTHR30627:SF1; PEPTIDOGLYCAN D,D-TRANSPEPTIDASE FTSI; 1.
DR Pfam; PF03717; PBP_dimer; 1.
DR Pfam; PF00905; Transpeptidase; 1.
DR SUPFAM; SSF56601; beta-lactamase/transpeptidase-like; 1.
DR SUPFAM; SSF56519; Penicillin binding protein dimerisation domain; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|ARBA:ARBA00023136};
KW Reference proteome {ECO:0000313|Proteomes:UP000018124};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989}.
FT DOMAIN 73..235
FT /note="Penicillin-binding protein dimerisation"
FT /evidence="ECO:0000259|Pfam:PF03717"
FT DOMAIN 276..596
FT /note="Penicillin-binding protein transpeptidase"
FT /evidence="ECO:0000259|Pfam:PF00905"
FT REGION 616..661
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 616..630
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 631..661
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 661 AA; 74129 MW; 3837327E5AB5D730 CRC64;
MVENRRRPAR RSYKRAEFNK GMQKKLAIVF VLIILALFAL CIRIGYLTKA KGDEYSIKVL
AQQGYTSKTL PYKRGDILDR NGNVLATSVK VYNLVIDSKV ILSNKKYLEP TVNVLTRYFD
LNKDELTKGI KERKDNSYWV VLKQLEYKDI EGYKDYINKE DPSKEEAKEI SYVKGVWFEE
EYKRMYPYNS LACSTLGFVN KDGSANIGIE SSYNDVLSGL NGREYGYVNS DNSMETVIKD
PTNGDTVVST IDMNIQRIVQ KAIKKYMKKY QPKRLAAVIA DPNTGEILAM ADNTTFNLNE
PWDLSFKYTE QEQENLSEKE ISDALNSRWK NFCVSDSFEP GSTIKPFTIA AAYEEGKTTR
NSTYFCDGYE VVGGFTIRCH DVSGHGTITT KQALAYSCND ALMRIGFDLG AKKLVEYQRR
FGFGAKTGID LPSETRGLVY DSNMGASSLA TNSFGQNINV NMIQMVAGFS SLVNGGNYYE
PHVVKEVVSE DGELIDNYSK TLVKETVTDK TSDFIKEALR AVVTDGTGKT AAIPGYTIGG
KTGTAEKHYT DGKTGRIPGE YIVSFLGCAP VENPEVVCYT IMDSPKEDTQ STAFSTEFWT
YIMKQVLPYM GVSQTEDAGK DKDITNTKKS DIKDNYSQGI TQEDMPVETQ TENQNDYTGE
E
//