ID R6TJ32_9LACO Unreviewed; 660 AA.
AC R6TJ32;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE SubName: Full=Putative capsular polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDC58742.1};
GN ORFNames=BN628_00016 {ECO:0000313|EMBL:CDC58742.1};
OS Ligilactobacillus ruminis CAG:367.
OC Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae;
OC Ligilactobacillus.
OX NCBI_TaxID=1263085 {ECO:0000313|EMBL:CDC58742.1, ECO:0000313|Proteomes:UP000018129};
RN [1] {ECO:0000313|EMBL:CDC58742.1, ECO:0000313|Proteomes:UP000018129}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:367 {ECO:0000313|Proteomes:UP000018129};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the polysaccharide synthase family.
CC {ECO:0000256|ARBA:ARBA00007430}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDC58742.1}.
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DR EMBL; CBFO010000105; CDC58742.1; -; Genomic_DNA.
DR AlphaFoldDB; R6TJ32; -.
DR Proteomes; UP000018129; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd05237; UDP_invert_4-6DH_SDR_e; 1.
DR Gene3D; 3.40.50.720; NAD(P)-binding Rossmann-like Domain; 2.
DR InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR InterPro; IPR003869; Polysac_CapD-like.
DR InterPro; IPR029063; SAM-dependent_MTases_sf.
DR PANTHER; PTHR43318:SF1; POLYSACCHARIDE BIOSYNTHESIS PROTEIN EPSC-RELATED; 1.
DR PANTHER; PTHR43318; UDP-N-ACETYLGLUCOSAMINE 4,6-DEHYDRATASE; 1.
DR Pfam; PF13727; CoA_binding_3; 1.
DR Pfam; PF02719; Polysacc_synt_2; 1.
DR SUPFAM; SSF51735; NAD(P)-binding Rossmann-fold domains; 1.
DR SUPFAM; SSF53335; S-adenosyl-L-methionine-dependent methyltransferases; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..37
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 57..75
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 87..104
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 116..135
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 295..604
FT /note="Polysaccharide biosynthesis protein CapD-like"
FT /evidence="ECO:0000259|Pfam:PF02719"
SQ SEQUENCE 660 AA; 74363 MW; A0112ED9010AA07B CRC64;
MKNGSEKKFE HWKLISLYLV VYDIIAVNVS YFAALFLRFD MRISSIPPEC LHAFMKFAPF
YTVFTLIVFH CLKLYNSLWQ FASFDELNRI IASSVVTTIF QGLFMTCLVT RMPASYYIFG
AFIQFALIVG IRFSYRYINL ERNRRYNNHA AIHNVMVIGA GSAGKTILRE MRNSQGMTGK
ACCVIDDNPN KWDRTMEGVP IVGGRDAILS AVKKYSIDQI MFAIPSASTE DKRDILNICK
ETKCELKSLP GIYQLANGEV SLSKMKAVNV EDLLGRDPIK VDMAEVFRQL TGKTILVTGG
GGSIGSELCR QIAAHNPKQL IIFDIYENNA YAIQQELVRK YGDKLNLVTL IGSVRDSRRL
DMIFDKYRPD IVYHAAAHKH VPLMETSPNE AIKNNVVGTY KVAYMALKYD VERFVLISTD
KAVNPTNIMG ASKRLCEMVI QSMERISENN DFDSLPLLHD HRKDGLKDVH PKTSRTKFVA
VRFGNVLGSN GSVIPLFKKQ IAEGGPVTVT HPDIIRYFMT ISEAVSLVLQ AGTYAKGGEI
FVLDMGSPVK IDTLARNLIK LSGYEPDVDI PIVYTGLRSG EKLYEEKLMK EEGLKKTANE
LIFIGQPIPF DMDNFFRNLE DLSQASYQNS ADIVERVEKV VSTFHPVGDH PTGKEKIYQE
//