ID R6W0Z3_9FIRM Unreviewed; 546 AA.
AC R6W0Z3;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE SubName: Full=Transcriptional regulator LuxR family {ECO:0000313|EMBL:CDD04758.1};
GN ORFNames=BN636_00322 {ECO:0000313|EMBL:CDD04758.1};
OS Ruminococcus sp. CAG:382.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae;
OC Ruminococcus.
OX NCBI_TaxID=1262957 {ECO:0000313|EMBL:CDD04758.1, ECO:0000313|Proteomes:UP000018166};
RN [1] {ECO:0000313|EMBL:CDD04758.1, ECO:0000313|Proteomes:UP000018166}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:382 {ECO:0000313|Proteomes:UP000018166};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDD04758.1}.
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DR EMBL; CBGH010000312; CDD04758.1; -; Genomic_DNA.
DR AlphaFoldDB; R6W0Z3; -.
DR STRING; 1262957.BN636_00322; -.
DR Proteomes; UP000018166; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd06170; LuxR_C_like; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR016032; Sig_transdc_resp-reg_C-effctor.
DR InterPro; IPR000792; Tscrpt_reg_LuxR_C.
DR InterPro; IPR039420; WalR-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR43214:SF41; NITRATE_NITRITE RESPONSE REGULATOR PROTEIN NARP; 1.
DR PANTHER; PTHR43214; TWO-COMPONENT RESPONSE REGULATOR; 1.
DR Pfam; PF00196; GerE; 1.
DR PRINTS; PR00038; HTHLUXR.
DR SMART; SM00421; HTH_LUXR; 1.
DR SUPFAM; SSF46894; C-terminal effector domain of the bipartite response regulators; 1.
DR PROSITE; PS50043; HTH_LUXR_2; 1.
PE 4: Predicted;
KW Activator {ECO:0000256|ARBA:ARBA00023159};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000018166};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 20..41
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 356..377
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 465..530
FT /note="HTH luxR-type"
FT /evidence="ECO:0000259|PROSITE:PS50043"
FT COILED 425..452
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 546 AA; 61881 MW; BE98E66357CFC852 CRC64;
MDRSKLHLKM PKQTMRRKLF LYTFAMAILL LALLATMLIL LGRFRTPKDE LFEKSDMQAQ
VFEREILTHR NTLAMMGVHL SEDASQIIGH YLSEHNMTFA ELDGNSGALL ELQKLIFDPL
RQYLFQTDCS GAFVILDVSV NPYSAEVTKS GLYLQVNGYE LDRRDAVLYR GIASVSRENG
VMPHRKWRLE TRCDFFLDWD AATADTGLSL EQSYRFTGLF TLPGMSERAM LITLPIRDMS
GSLIGICGFE LSESYFALFH SQVSKLSHPT CLMAEFSEND TYSSFLACGA FNDYYYAPES
ALTGRDIGSG LTELRCENES FVGVVRSYIG NDTSPGFSTI VMTPEADFAK ATFKNALSIG
FLVLLLVVLS VFCCIYVSHR YLTPILKGLE QIKAESSQRK RTDIVEINNV LDFLSSKERE
SADHLASLIE ERNTAKEAYD RAQAEIDKLA ERTKDTVDPE AYRFFLERIP GLSKTEREIF
DYYVSGLSTK EILESANIKE STLKYHNSHI YEKLNVKSRK ELLVYISLMN QSKNGGNDCD
PFTKAE
//
