ID R6YX78_9FIRM Unreviewed; 278 AA.
AC R6YX78;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 44.
DE SubName: Full=Transcriptional regulator AraC family {ECO:0000313|EMBL:CDD22912.1};
GN ORFNames=BN617_00622 {ECO:0000313|EMBL:CDD22912.1};
OS Firmicutes bacterium CAG:345.
OC Bacteria; Bacillota.
OX NCBI_TaxID=1263020 {ECO:0000313|EMBL:CDD22912.1, ECO:0000313|Proteomes:UP000018232};
RN [1] {ECO:0000313|EMBL:CDD22912.1, ECO:0000313|Proteomes:UP000018232}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:345 {ECO:0000313|Proteomes:UP000018232};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDD22912.1}.
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DR EMBL; CBGR010000020; CDD22912.1; -; Genomic_DNA.
DR AlphaFoldDB; R6YX78; -.
DR STRING; 1263020.BN617_00622; -.
DR Proteomes; UP000018232; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR Gene3D; 2.60.120.10; Jelly Rolls; 1.
DR InterPro; IPR003313; AraC-bd.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR037923; HTH-like.
DR InterPro; IPR018060; HTH_AraC.
DR InterPro; IPR018062; HTH_AraC-typ_CS.
DR InterPro; IPR014710; RmlC-like_jellyroll.
DR PANTHER; PTHR46796:SF2; HTH-TYPE TRANSCRIPTIONAL ACTIVATOR RHAS; 1.
DR PANTHER; PTHR46796; HTH-TYPE TRANSCRIPTIONAL ACTIVATOR RHAS-RELATED; 1.
DR Pfam; PF02311; AraC_binding; 1.
DR Pfam; PF12833; HTH_18; 1.
DR SMART; SM00342; HTH_ARAC; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR SUPFAM; SSF51215; Regulatory protein AraC; 1.
DR PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000018232};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 180..278
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000259|PROSITE:PS01124"
SQ SEQUENCE 278 AA; 31488 MW; D1B17FB543FFB651 CRC64;
MKTTKITVEL LSGTTLAIHP DNYYRHPLLY NVVQSGYVIG GLKHSVSRTG LNSYGLYGVT
KGEVVLKTKN KTYKAHAGDT LFFSQQEDHT IINGGDIPYE AYFVYLYGPE VKGFYDSFQS
KFEYIMTGFI PPSFVDAVRQ ITDMIRSGNE NIYLISSLLY NMLTELLQKC DVSDKSTGIT
NAIKYVMEHY KEKITLDTLS SMAYMDKFYF IRQFHSLTGF TPKEYQNELR LNEAVSLLKN
TDLSVTAIAN EVGFSDAKGL IALIKRRKGC SPSQLRKK
//
