ID R6ZK26_9FIRM Unreviewed; 379 AA.
AC R6ZK26;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 35.
DE SubName: Full=Lipopolysaccharide biosynthesis protein rffA {ECO:0000313|EMBL:CDD46450.1};
GN ORFNames=BN699_01974 {ECO:0000313|EMBL:CDD46450.1};
OS Firmicutes bacterium CAG:534.
OC Bacteria; Bacillota.
OX NCBI_TaxID=1263027 {ECO:0000313|EMBL:CDD46450.1, ECO:0000313|Proteomes:UP000018220};
RN [1] {ECO:0000313|EMBL:CDD46450.1, ECO:0000313|Proteomes:UP000018220}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:534 {ECO:0000313|Proteomes:UP000018220};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the DegT/DnrJ/EryC1 family.
CC {ECO:0000256|RuleBase:RU004508}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDD46450.1}.
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DR EMBL; CBHC010000058; CDD46450.1; -; Genomic_DNA.
DR AlphaFoldDB; R6ZK26; -.
DR STRING; 1263027.BN699_01974; -.
DR Proteomes; UP000018220; Unassembled WGS sequence.
DR GO; GO:0003824; F:catalytic activity; IEA:UniProt.
DR CDD; cd00616; AHBA_syn; 1.
DR Gene3D; 3.90.1150.10; Aspartate Aminotransferase, domain 1; 1.
DR Gene3D; 3.40.640.10; Type I PLP-dependent aspartate aminotransferase-like (Major domain); 1.
DR InterPro; IPR000653; DegT/StrS_aminotransferase.
DR InterPro; IPR015424; PyrdxlP-dep_Trfase.
DR InterPro; IPR015421; PyrdxlP-dep_Trfase_major.
DR InterPro; IPR015422; PyrdxlP-dep_Trfase_small.
DR InterPro; IPR012749; WecE-like.
DR NCBIfam; TIGR02379; ECA_wecE; 1.
DR PANTHER; PTHR30244:SF34; DTDP-4-AMINO-4,6-DIDEOXYGALACTOSE TRANSAMINASE; 1.
DR PANTHER; PTHR30244; TRANSAMINASE; 1.
DR Pfam; PF01041; DegT_DnrJ_EryC1; 1.
DR PIRSF; PIRSF000390; PLP_StrS; 1.
DR SUPFAM; SSF53383; PLP-dependent transferases; 1.
PE 3: Inferred from homology;
KW Pyridoxal phosphate {ECO:0000256|PIRSR:PIRSR000390-2,
KW ECO:0000256|RuleBase:RU004508};
KW Reference proteome {ECO:0000313|Proteomes:UP000018220}.
FT ACT_SITE 182
FT /note="Proton acceptor"
FT /evidence="ECO:0000256|PIRSR:PIRSR000390-1"
FT MOD_RES 182
FT /note="N6-(pyridoxal phosphate)lysine"
FT /evidence="ECO:0000256|PIRSR:PIRSR000390-2"
SQ SEQUENCE 379 AA; 43139 MW; 888CDEC7812C2BEB CRC64;
MMIRFNVPPS VDGEMDNIKK AIESMHICGD GAFTKKCSEY LEKLTGTSKC LLTTSCTHAL
EMAALLCDIK EGDEVIMPSY TFVSTADAFV LRGATPVFVD IRPDTMNIDE TLIEAAITEK
TKAIAVVHYA GVACEMDVIM DIARRHHLKV VEDAAQAIMC TYKGKALGTI GDFGCFSFHE
TKNFSMGEGG AILIRDPEYI EKAEILREKG TDRSKYYRGQ VDKYRWQNFG SSYLPSDINA
AYLYSQFEVA ETINQARLDR FHQYYELLTP LMEAGKIELP MVPEGCEQSG HMFYIKTKDM
EERTALIDFL KENDIMAVFH YIPLHTAPAG MKFGRFHGMD RYTTKESERL LRLPMFYQLT
PEQVEYIAGK VKEFYETRR
//