ID R7QL64_CHOCR Unreviewed; 299 AA.
AC R7QL64;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 43.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:CDF38231.1};
GN ORFNames=CHC_T00000592001 {ECO:0000313|EMBL:CDF38231.1};
OS Chondrus crispus (Carrageen Irish moss) (Polymorpha crispa).
OC Eukaryota; Rhodophyta; Florideophyceae; Rhodymeniophycidae; Gigartinales;
OC Gigartinaceae; Chondrus.
OX NCBI_TaxID=2769 {ECO:0000313|EMBL:CDF38231.1, ECO:0000313|Proteomes:UP000012073};
RN [1] {ECO:0000313|Proteomes:UP000012073}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Stackhouse {ECO:0000313|Proteomes:UP000012073};
RX PubMed=23503846; DOI=10.1073/pnas.1221259110;
RA Collen J., Porcel B., Carre W., Ball S.G., Chaparro C., Tonon T.,
RA Barbeyron T., Michel G., Noel B., Valentin K., Elias M., Artiguenave F.,
RA Arun A., Aury J.M., Barbosa-Neto J.F., Bothwell J.H., Bouget F.Y.,
RA Brillet L., Cabello-Hurtado F., Capella-Gutierrez S., Charrier B.,
RA Cladiere L., Cock J.M., Coelho S.M., Colleoni C., Czjzek M., Da Silva C.,
RA Delage L., Denoeud F., Deschamps P., Dittami S.M., Gabaldon T.,
RA Gachon C.M., Groisillier A., Herve C., Jabbari K., Katinka M., Kloareg B.,
RA Kowalczyk N., Labadie K., Leblanc C., Lopez P.J., McLachlan D.H.,
RA Meslet-Cladiere L., Moustafa A., Nehr Z., Nyvall Collen P., Panaud O.,
RA Partensky F., Poulain J., Rensing S.A., Rousvoal S., Samson G.,
RA Symeonidi A., Weissenbach J., Zambounis A., Wincker P., Boyen C.;
RT "Genome structure and metabolic features in the red seaweed Chondrus
RT crispus shed light on evolution of the Archaeplastida.";
RL Proc. Natl. Acad. Sci. U.S.A. 110:5247-5252(2013).
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DR EMBL; HG001904; CDF38231.1; -; Genomic_DNA.
DR RefSeq; XP_005718116.1; XM_005718059.1.
DR AlphaFoldDB; R7QL64; -.
DR STRING; 2769.R7QL64; -.
DR EnsemblPlants; CDF38231; CDF38231; CHC_T00000592001.
DR GeneID; 17325833; -.
DR Gramene; CDF38231; CDF38231; CHC_T00000592001.
DR KEGG; ccp:CHC_T00000592001; -.
DR OrthoDB; 20023at2759; -.
DR PhylomeDB; R7QL64; -.
DR Proteomes; UP000012073; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR CDD; cd00167; SANT; 3.
DR Gene3D; 1.10.10.60; Homeodomain-like; 3.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017930; Myb_dom.
DR InterPro; IPR001005; SANT/Myb.
DR PANTHER; PTHR46621; SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4; 1.
DR PANTHER; PTHR46621:SF1; SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4; 1.
DR Pfam; PF13921; Myb_DNA-bind_6; 1.
DR Pfam; PF00249; Myb_DNA-binding; 2.
DR SMART; SM00717; SANT; 4.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR PROSITE; PS51294; HTH_MYB; 3.
DR PROSITE; PS50090; MYB_LIKE; 3.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000012073}.
FT DOMAIN 80..131
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
FT DOMAIN 86..135
FT /note="HTH myb-type"
FT /evidence="ECO:0000259|PROSITE:PS51294"
FT DOMAIN 137..177
FT /note="HTH myb-type"
FT /evidence="ECO:0000259|PROSITE:PS51294"
FT DOMAIN 192..239
FT /note="HTH myb-type"
FT /evidence="ECO:0000259|PROSITE:PS51294"
FT DOMAIN 192..235
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
FT DOMAIN 236..292
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
SQ SEQUENCE 299 AA; 33824 MW; 39BD3A226907524D CRC64;
MRSGCARYKT KLLYQTLRAR KTAHDKPANT YSVSLVLHLT ARHTLCTDTR FPGRSPHLNA
PNTAAKHPNF GDVHPVSLRR GRYSGRPWSE QEDARLREAV SQHGRDWAQA AAHVGNGRTN
RGCRQRWLLR LQTSVSKGPF TMAEMSRLRD LLRAHPKQWT KVAQLLGSGH SGDQVRDFAV
SGSGMAEHYR VWTAEEDQAL RDAVAKHGVG KWAAVADLLE RRDDASCYSR WTFSLDPKLV
RGAWSEDEDR RLVAAVQALE KSGEPFHFGD VAVLMQNRRH RKACRSRYKR LIAKAQASK
//
