ID RECA4_ARATH Reviewed; 226 AA.
AC Q3EAS6; F4JBG3;
DT 24-JAN-2006, integrated into UniProtKB/Swiss-Prot.
DT 16-NOV-2011, sequence version 2.
DT 27-MAR-2024, entry version 123.
DE RecName: Full=Putative DNA repair protein recA homolog 4;
DE AltName: Full=Recombinase A homolog 4;
GN OrderedLocusNames=At3g32920; ORFNames=T7B9.20;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RA Nakamura Y.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. III.";
RL Submitted (MAY-2000) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- FUNCTION: Involved in recombination ability and DNA strand transfer
CC activity. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=1;
CC Comment=A number of isoforms are produced. According to EST
CC sequences.;
CC Name=1;
CC IsoId=Q3EAS6-1; Sequence=Displayed;
CC -!- SIMILARITY: Belongs to the RecA family. {ECO:0000305}.
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DR EMBL; AP002067; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CP002686; AEE77702.1; -; Genomic_DNA.
DR RefSeq; NP_189781.4; NM_114061.4. [Q3EAS6-1]
DR AlphaFoldDB; Q3EAS6; -.
DR SMR; Q3EAS6; -.
DR STRING; 3702.Q3EAS6; -.
DR PaxDb; 3702-AT3G32920-1; -.
DR EnsemblPlants; AT3G32920.1; AT3G32920.1; AT3G32920. [Q3EAS6-1]
DR GeneID; 823055; -.
DR Gramene; AT3G32920.1; AT3G32920.1; AT3G32920. [Q3EAS6-1]
DR KEGG; ath:AT3G32920; -.
DR Araport; AT3G32920; -.
DR TAIR; AT3G32920; -.
DR eggNOG; KOG1433; Eukaryota.
DR HOGENOM; CLU_040469_7_0_1; -.
DR InParanoid; Q3EAS6; -.
DR OMA; TCAWIDA; -.
DR OrthoDB; 451843at2759; -.
DR PRO; PR:Q3EAS6; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q3EAS6; baseline and differential.
DR Genevisible; Q3EAS6; AT.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0140664; F:ATP-dependent DNA damage sensor activity; IEA:InterPro.
DR GO; GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR013765; DNA_recomb/repair_RecA.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR049428; RecA-like_N.
DR InterPro; IPR020588; RecA_ATP-bd.
DR InterPro; IPR020587; RecA_monomer-monomer_interface.
DR PANTHER; PTHR45900:SF6; DNA REPAIR PROTEIN RECA HOMOLOG 3, MITOCHONDRIAL-RELATED; 1.
DR PANTHER; PTHR45900; RECA; 1.
DR Pfam; PF00154; RecA; 2.
DR PRINTS; PR00142; RECA.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS50162; RECA_2; 1.
DR PROSITE; PS50163; RECA_3; 1.
PE 3: Inferred from homology;
KW Alternative splicing; ATP-binding; Cytoplasm; DNA damage;
KW DNA recombination; DNA-binding; Nucleotide-binding; Reference proteome.
FT CHAIN 1..226
FT /note="Putative DNA repair protein recA homolog 4"
FT /id="PRO_0000122914"
FT BINDING 41..48
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255"
SQ SEQUENCE 226 AA; 24286 MW; 71885D70D25E92CC CRC64;
MYLSRAVSPR NVPVFSTGSF ALDVALGVGG LPKGRLVEIY GPEASGKTAL ALHMLSMLLI
RSLAKAIGVN TENLLLSQPD CGKQALSLVD TLIQSGSVDV IVVDSVAALV PKGELDGEMG
DAHMAIQARL MSQALRKFSH SLLLSQTLLI FINQVRERFG GPTEVTSGGN ALKFYAPMRL
DIKRIGLIKK GEEFFRMTKC LCLNACAHNG KSSLREDSEE QARSAI
//
