ID S3CKX4_OPHP1 Unreviewed; 672 AA.
AC S3CKX4;
DT 18-SEP-2013, integrated into UniProtKB/TrEMBL.
DT 18-SEP-2013, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE SubName: Full=Rna-binding post-transcriptional regulator cip2 {ECO:0000313|EMBL:EPE07138.1};
GN ORFNames=F503_07789 {ECO:0000313|EMBL:EPE07138.1};
OS Ophiostoma piceae (strain UAMH 11346) (Sap stain fungus).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes;
OC Sordariomycetidae; Ophiostomatales; Ophiostomataceae; Ophiostoma.
OX NCBI_TaxID=1262450 {ECO:0000313|EMBL:EPE07138.1, ECO:0000313|Proteomes:UP000016923};
RN [1] {ECO:0000313|EMBL:EPE07138.1, ECO:0000313|Proteomes:UP000016923}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=UAMH 11346 {ECO:0000313|EMBL:EPE07138.1,
RC ECO:0000313|Proteomes:UP000016923};
RX PubMed=23725015; DOI=10.1186/1471-2164-14-373;
RA Haridas S., Wang Y., Lim L., Massoumi Alamouti S., Jackman S., Docking R.,
RA Robertson G., Birol I., Bohlmann J., Breuil C.;
RT "The genome and transcriptome of the pine saprophyte Ophiostoma piceae, and
RT a comparison with the bark beetle-associated pine pathogen Grosmannia
RT clavigera.";
RL BMC Genomics 14:373-373(2013).
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DR EMBL; KE148151; EPE07138.1; -; Genomic_DNA.
DR AlphaFoldDB; S3CKX4; -.
DR STRING; 1262450.S3CKX4; -.
DR VEuPathDB; FungiDB:F503_07789; -.
DR eggNOG; KOG0108; Eukaryota.
DR HOGENOM; CLU_022096_2_0_1; -.
DR OMA; GMQRDDS; -.
DR OrthoDB; 1363189at2759; -.
DR Proteomes; UP000016923; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd12253; RRM_PIN4_like; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 3.30.1370.50; R3H-like domain; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR034186; PIN4-like_RRM.
DR InterPro; IPR001374; R3H_dom.
DR InterPro; IPR036867; R3H_dom_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR23003; RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN; 1.
DR PANTHER; PTHR23003:SF17; RNA-BINDING PROTEIN PIN4; 1.
DR Pfam; PF01424; R3H; 1.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF82708; R3H domain; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS51061; R3H; 1.
DR PROSITE; PS50102; RRM; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000016923};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 210..288
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 354..418
FT /note="R3H"
FT /evidence="ECO:0000259|PROSITE:PS51061"
FT REGION 1..69
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 119..153
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 293..350
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 468..487
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 497..535
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 580..672
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 40..66
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 135..149
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 293..312
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 468..483
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 498..523
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 648..672
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 672 AA; 72021 MW; 2E3F35FE1AB96CBC CRC64;
MNGQQTQSDY YGSGFGAPPM PHNPNPQRPG YATAVGLPSA LSNGRRSQPS GPDMNGQQNG
TPSLYSDDRF ASFEPSHRFD RTPSAQSNLS AAYSMFGSNA PQSTWGYNGA GSAATMGGPM
NDGSRIRPNN RRPPIHAEWT SNNDQLGNPN GHMPYFAPPH MGGQQQLGIP SATSPDPFTV
PPSVNVQNYG QPDMRSLSDN RKDMGDLIPT AIVIKNIPFN VRKEVLTNIM VELHLPQPYA
FNYHFDNGVF RGLAFANFQS PTDTKHVIES MNGLDIHGRK LRVEYKKMLP EHERERIERE
KREKRGQLEE QHRGPAHQIS ISSMAAAAAA NNATRAPAPQ PDRNAVGRVP DMNDPITLRY
YVQLCMFIKD ESQEVLIFPA DTPPEDRRLV HILAHNMGLE HTSIGEGDNR QIHVSRVKFA
NNGGAHQSAV QQLGVTIDGH PRGLSRAATY DFNDRQHHTN LNTINTRSQN LTIPSNSPDT
HQHGMNGLRG VKSFADLRSV SPSPSSSHVS NGGPVSNHQP NGIHSAGGVG GFMSHFPSPA
ENNSFGHALT THNSGSSVNL SSAVDTSGLS ALSSLGLGSS PFDTSSSPAL GSGRAAGAPV
PGAIGSQRPS ANGANGSRAN PERQPRGPGG DWEGGFARAR SNGHMHRSSD SSDNINSSAS
ANSASRNGNG LY
//
