GenomeNet

Database: UniProt
Entry: S4RYL9_PETMA
LinkDB: S4RYL9_PETMA
Original site: S4RYL9_PETMA 
ID   S4RYL9_PETMA            Unreviewed;       229 AA.
AC   S4RYL9;
DT   18-SEP-2013, integrated into UniProtKB/TrEMBL.
DT   18-SEP-2013, sequence version 1.
DT   27-MAR-2024, entry version 39.
DE   RecName: Full=IF rod domain-containing protein {ECO:0000259|Pfam:PF00038};
OS   Petromyzon marinus (Sea lamprey).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Cyclostomata;
OC   Hyperoartia; Petromyzontiformes; Petromyzontidae; Petromyzon.
OX   NCBI_TaxID=7757 {ECO:0000313|Ensembl:ENSPMAP00000010310.1, ECO:0000313|Proteomes:UP000245300};
RN   [1] {ECO:0000313|Ensembl:ENSPMAP00000010310.1}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (NOV-2023) to UniProtKB.
CC   -!- FUNCTION: Vimentins are class-III intermediate filaments found in
CC       various non-epithelial cells, especially mesenchymal cells. Vimentin is
CC       attached to the nucleus, endoplasmic reticulum, and mitochondria,
CC       either laterally or terminally. {ECO:0000256|ARBA:ARBA00002825}.
CC   -!- SIMILARITY: Belongs to the intermediate filament family.
CC       {ECO:0000256|RuleBase:RU000685}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   AlphaFoldDB; S4RYL9; -.
DR   STRING; 7757.ENSPMAP00000010310; -.
DR   Ensembl; ENSPMAT00000010356.1; ENSPMAP00000010310.1; ENSPMAG00000009378.1.
DR   HOGENOM; CLU_105470_0_0_1; -.
DR   Proteomes; UP000245300; Unplaced.
DR   GO; GO:0005882; C:intermediate filament; IEA:UniProtKB-KW.
DR   Gene3D; 1.20.5.170; -; 1.
DR   InterPro; IPR018039; IF_conserved.
DR   InterPro; IPR039008; IF_rod_dom.
DR   PANTHER; PTHR45652; GLIAL FIBRILLARY ACIDIC PROTEIN; 1.
DR   PANTHER; PTHR45652:SF5; VIMENTIN; 1.
DR   Pfam; PF00038; Filament; 1.
DR   SUPFAM; SSF64593; Intermediate filament protein, coiled coil region; 1.
DR   PROSITE; PS00226; IF_ROD_1; 1.
PE   3: Inferred from homology;
KW   Coiled coil {ECO:0000256|ARBA:ARBA00023054};
KW   Intermediate filament {ECO:0000256|ARBA:ARBA00022754,
KW   ECO:0000256|RuleBase:RU000685};
KW   Reference proteome {ECO:0000313|Proteomes:UP000245300}.
FT   DOMAIN          4..79
FT                   /note="IF rod"
FT                   /evidence="ECO:0000259|Pfam:PF00038"
FT   REGION          79..103
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        81..96
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   229 AA;  22345 MW;  B188808F6C914C63 CRC64;
     LQKKIQNQTL QSTLQEYQYH STTSVTDVQN LIVSLEQEIE ASHVALQNQL VNYQELLDVK
     TALDTEIQTY RRLLEGEEAI RPSRSSSSSR LATTPSPAQL AGGGGVAVVT GGGGTVLASG
     GGGGGVATLG GTGAVVAGAG GVTGMSVIEG GTAMLSGGTV GEGGMVMAGA DGRGAAATMS
     AGGMSGGAQF QQAAAGPIIG GVGIAGGNIT AGGGGFAIEI PVKLASNTR
//
DBGET integrated database retrieval system