ID S5FQ13_9VIRU Unreviewed; 109 AA.
AC S5FQ13;
DT 16-OCT-2013, integrated into UniProtKB/TrEMBL.
DT 16-OCT-2013, sequence version 1.
DT 14-DEC-2022, entry version 29.
DE RecName: Full=Non-structural polyprotein 1AB {ECO:0000256|ARBA:ARBA00019743};
DE Flags: Fragment;
GN Name=ORF1b {ECO:0000313|EMBL:AGQ46647.1};
OS Avian nephritis virus.
OC Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes;
OC Stellavirales; Astroviridae; Avastrovirus.
OX NCBI_TaxID=1354735 {ECO:0000313|EMBL:AGQ46647.1};
RN [1] {ECO:0000313|EMBL:AGQ46647.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Kr/ADL112770-ANV/2011 {ECO:0000313|EMBL:AGQ46647.1};
RX PubMed=24135590; DOI=10.3382/ps.2013-03280;
RA Koo B.S., Lee H.R., Jeon E.O., Han M.S., Min K.C., Lee S.B., Mo I.P.;
RT "Molecular survey of enteric viruses in commercial chicken farms in Korea
RT with a history of enteritis.";
RL Poult. Sci. 92:2876-2885(2013).
CC -!- FUNCTION: Contains the viral protease participating in the cleavage of
CC the polyprotein into functional products. It contains also the
CC activities necessary for replication of genomic RNA, as well as
CC transcription of subgenomic mRNA. {ECO:0000256|ARBA:ARBA00029407}.
CC -!- SIMILARITY: Belongs to the astroviridae polyprotein 1AB family.
CC {ECO:0000256|ARBA:ARBA00005873}.
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DR EMBL; KC593392; AGQ46647.1; -; Genomic_RNA.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003968; F:RNA-dependent RNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR GO; GO:0039694; P:viral RNA genome replication; IEA:InterPro.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR001205; RNA-dir_pol_C.
DR InterPro; IPR007094; RNA-dir_pol_PSvirus.
DR Pfam; PF00680; RdRP_1; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR PROSITE; PS50507; RDRP_SSRNA_POS; 1.
PE 3: Inferred from homology;
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW RNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022484};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Viral RNA replication {ECO:0000256|ARBA:ARBA00022953}.
FT DOMAIN 9..109
FT /note="RdRp catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50507"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:AGQ46647.1"
FT NON_TER 109
FT /evidence="ECO:0000313|EMBL:AGQ46647.1"
SQ SEQUENCE 109 AA; 12876 MW; 24615B3D8C8994D4 CRC64;
RRITSCGRTQ VLELDWTRFD GTIPVQLFQR MRAMRKFFLT RRSRKRYGKL LDWYNAQLTD
RITLLPTGEV THVKKGNPSG QFSTTVDNNL VNEWLTAFEF AFQHLENHG
//
