ID S5ZQ39_9HYME Unreviewed; 257 AA.
AC S5ZQ39;
DT 16-OCT-2013, integrated into UniProtKB/TrEMBL.
DT 16-OCT-2013, sequence version 1.
DT 24-JAN-2024, entry version 29.
DE RecName: Full=DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00012418};
DE EC=2.7.7.6 {ECO:0000256|ARBA:ARBA00012418};
DE Flags: Fragment;
GN Name=POLII {ECO:0000313|EMBL:AGT39966.1};
OS Australomymar sp. D2026.
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Endopterygota; Hymenoptera; Apocrita; Proctotrupomorpha;
OC Chalcidoidea; Mymaridae; Australomymar.
OX NCBI_TaxID=1119201 {ECO:0000313|EMBL:AGT39966.1};
RN [1] {ECO:0000313|EMBL:AGT39966.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=23936325;
RA Klopfstein S., Vilhelmsen L., Heraty J.M., Sharkey M., Ronquist F.;
RT "The hymenopteran tree of life: evidence from protein-coding genes and
RT objectively aligned ribosomal data.";
RL PLoS ONE 8:E69344-E69344(2013).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6; Evidence={ECO:0000256|ARBA:ARBA00024550};
CC -!- SIMILARITY: Belongs to the RNA polymerase beta' chain family.
CC {ECO:0000256|ARBA:ARBA00006460}.
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DR EMBL; KC213072; AGT39966.1; -; Genomic_DNA.
DR AlphaFoldDB; S5ZQ39; -.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR Gene3D; 1.10.132.30; -; 1.
DR Gene3D; 6.10.250.2940; -; 1.
DR Gene3D; 1.10.274.100; RNA polymerase Rpb1, domain 3; 1.
DR InterPro; IPR045867; DNA-dir_RpoC_beta_prime.
DR InterPro; IPR007066; RNA_pol_Rpb1_3.
DR InterPro; IPR042102; RNA_pol_Rpb1_3_sf.
DR InterPro; IPR007083; RNA_pol_Rpb1_4.
DR InterPro; IPR038120; Rpb1_funnel_sf.
DR PANTHER; PTHR19376; DNA-DIRECTED RNA POLYMERASE; 1.
DR PANTHER; PTHR19376:SF37; DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1; 1.
DR Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR SUPFAM; SSF64484; beta and beta-prime subunits of DNA dependent RNA-polymerase; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 2..109
FT /note="RNA polymerase Rpb1"
FT /evidence="ECO:0000259|Pfam:PF04983"
FT DOMAIN 136..240
FT /note="RNA polymerase Rpb1"
FT /evidence="ECO:0000259|Pfam:PF05000"
FT COILED 116..143
FT /evidence="ECO:0000256|SAM:Coils"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:AGT39966.1"
FT NON_TER 257
FT /evidence="ECO:0000313|EMBL:AGT39966.1"
SQ SEQUENCE 257 AA; 28542 MW; D714D714A108584F CRC64;
PLWTGKQIFS LIIPGNVNMI RTHSTHPDEE DEGPYKWISP GDTKVMVEHG ELIMGILCKK
TLGTSAGSLL HICMLELGHE VCGQFYGNIQ TVVNNWLLLE GHSIGIGDTI ADPQTYMEIQ
KAIKKAKEDV IEVIQKAHNM ELEPTPGNTL RQTFENQVNR ILNDARDKTG GSAKKSLTEY
NNLKAMVVSG SKGSNINISQ VIACVGQQNV EGKRIPFGFR KRTLPHFIKD DYGPESRGFV
ENSYLAGLTP SEFYFHA
//
