ID S8C9R7_9LAMI Unreviewed; 664 AA.
AC S8C9R7;
DT 16-OCT-2013, integrated into UniProtKB/TrEMBL.
DT 16-OCT-2013, sequence version 1.
DT 24-JAN-2024, entry version 32.
DE RecName: Full=RNA helicase {ECO:0000256|ARBA:ARBA00012552};
DE EC=3.6.4.13 {ECO:0000256|ARBA:ARBA00012552};
DE Flags: Fragment;
GN ORFNames=M569_11233 {ECO:0000313|EMBL:EPS63550.1};
OS Genlisea aurea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea.
OX NCBI_TaxID=192259 {ECO:0000313|EMBL:EPS63550.1, ECO:0000313|Proteomes:UP000015453};
RN [1] {ECO:0000313|EMBL:EPS63550.1, ECO:0000313|Proteomes:UP000015453}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23855885;
RA Leushkin E.V., Sutormin R.A., Nabieva E.R., Penin A.A., Kondrashov A.S.,
RA Logacheva M.D.;
RT "The miniature genome of a carnivorous plant Genlisea aurea contains a low
RT number of genes and short non-coding sequences.";
RL BMC Genomics 14:476-476(2013).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13;
CC Evidence={ECO:0000256|ARBA:ARBA00001556};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EPS63550.1}.
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DR EMBL; AUSU01005411; EPS63550.1; -; Genomic_DNA.
DR AlphaFoldDB; S8C9R7; -.
DR OrthoDB; 53793at2759; -.
DR Proteomes; UP000015453; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003724; F:RNA helicase activity; IEA:UniProtKB-EC.
DR CDD; cd00048; DSRM_SF; 1.
DR CDD; cd18791; SF2_C_RHA; 1.
DR Gene3D; 1.20.120.1080; -; 1.
DR Gene3D; 3.30.160.20; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR011709; DEAD-box_helicase_OB_fold.
DR InterPro; IPR014720; dsRBD_dom.
DR InterPro; IPR048333; HA2_WH.
DR InterPro; IPR007502; Helicase-assoc_dom.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR PANTHER; PTHR18934:SF146; DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH5, MITOCHONDRIAL; 1.
DR Pfam; PF00035; dsrm; 1.
DR Pfam; PF21010; HA2_C; 1.
DR Pfam; PF04408; HA2_N; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF07717; OB_NTP_bind; 1.
DR SMART; SM00358; DSRM; 1.
DR SMART; SM00847; HA2; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF54768; dsRNA-binding domain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS50137; DS_RBD; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000015453};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00266}.
FT DOMAIN 34..208
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT DOMAIN 577..642
FT /note="DRBM"
FT /evidence="ECO:0000259|PROSITE:PS50137"
FT NON_TER 664
FT /evidence="ECO:0000313|EMBL:EPS63550.1"
SQ SEQUENCE 664 AA; 73269 MW; 6F3C2691CB95800A CRC64;
MIQDTLFGAD FSQYNARTKD SLSCWNPDSL GFNLIEHLLL RICGCGRPGA VLVFLTGWDD
IISLKDKLQA HPVLGDGTRT LLLPCHGSMS SEEQKLIFCH PPYGVRKIVL ATNIAETSIT
IDDVVFVIDC GKAKETSYDA LNNTPRLLPS WISKVSAKQR RGRAGRVQPG ECYHLYPRCV
YDAFADYQLP EILRTPLQSL CLQIKSLKIR DISDFLSQAL ISPEKLAVQN AIEYLKIIGA
LDESEDLTVL GRYLTMLPME PKLGKMVILG AIFKCLDPIL TVVAGLSVRD PFVTPFDKKE
QAEAAKAQFS QGYSDHLALV RAYEGWKAAG NGFYGFNYCW INFLSFQSMK AIDSLRVEFY
SLLKDTGLVD SDPTAYNILS NDEHLIRAVI CYGLYPGICS IVYNQKTLLL KTMEDGNVRL
NYSSVNARQS LIPYPWLVFS EKFKVNSVFL RDSTAVSDSM LILFGGSITR GDLGRGHLKM
LGGYLEFFMD GAVAELYIRL RDELDKFIHT KLVNPKIDVN SYRELLSALR LVVSDDPSSG
RFVLVSGCSS SSAAAPAAAA VQEQKTIAAP NCSAGENTKG ELQTLMTRAG YGFPSYKTVQ
LNDLRFQSTV DVNGTTITGK ACSNKKLAEK DAAGQALAWL LGEDGAKHGV GRISALLTKR
KKDH
//