ID T0J0F9_9SPHN Unreviewed; 344 AA.
AC T0J0F9;
DT 16-OCT-2013, integrated into UniProtKB/TrEMBL.
DT 16-OCT-2013, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE SubName: Full=LacI family transcriptional regulator {ECO:0000313|EMBL:EQB30292.1};
GN ORFNames=M529_20705 {ECO:0000313|EMBL:EQB30292.1};
OS Sphingobium ummariense RL-3.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingobium.
OX NCBI_TaxID=1346791 {ECO:0000313|EMBL:EQB30292.1, ECO:0000313|Proteomes:UP000015523};
RN [1] {ECO:0000313|EMBL:EQB30292.1, ECO:0000313|Proteomes:UP000015523}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RL-3 {ECO:0000313|EMBL:EQB30292.1,
RC ECO:0000313|Proteomes:UP000015523};
RX PubMed=24233594;
RA Kohli P., Dua A., Sangwan N., Oldach P., Khurana J.P., Lal R.;
RT "Draft Genome Sequence of Sphingobium ummariense Strain RL-3, a
RT Hexachlorocyclohexane-Degrading Bacterium.";
RL Genome Announc. 1:e00956-13(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EQB30292.1}.
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DR EMBL; AUWY01000123; EQB30292.1; -; Genomic_DNA.
DR RefSeq; WP_021319722.1; NZ_AUWY01000123.1.
DR AlphaFoldDB; T0J0F9; -.
DR STRING; 1346791.M529_20705; -.
DR PATRIC; fig|1346791.3.peg.4005; -.
DR eggNOG; COG1609; Bacteria.
DR OrthoDB; 7939625at2; -.
DR Proteomes; UP000015523; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01392; HTH_LacI; 1.
DR CDD; cd01545; PBP1_SalR; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR000843; HTH_LacI.
DR InterPro; IPR046335; LacI/GalR-like_sensor.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR028082; Peripla_BP_I.
DR PANTHER; PTHR30146:SF138; HTH-TYPE TRANSCRIPTIONAL REGULATOR KDGR; 1.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR Pfam; PF00356; LacI; 1.
DR Pfam; PF13377; Peripla_BP_3; 1.
DR SMART; SM00354; HTH_LACI; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
DR PROSITE; PS50932; HTH_LACI_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000015523};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 2..53
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
FT DOMAIN 9..63
FT /note="HTH lacI-type"
FT /evidence="ECO:0000259|PROSITE:PS50932"
SQ SEQUENCE 344 AA; 36136 MW; CAA96BEF2B510CF4 CRC64;
MARRRENGVT IRAVAERAGV SAMTVSNVIN GAGRASATTV ATVQAAIAEL GYVPNLAARR
LAKARATTVG LIYSNRRTPF LDAVLVGSLR ATNANGLQLI LRDGDGVTLD EAERIAQELV
RSGADALLLI PPFAEQLSGS AILPTLGVPF AAIATGTPLS GISTVRIDNQ AAMEALTRRV
IADGHRRIAY VAGPDHYSVV AARLDGFYAA LRNAGLRVDD SMIVEHSAFD HASGMAAAQM
LLGRPNRPTA ILCSSDDLAA GVIAQAGQMG LTLPHDLSVT GFDDTILASR VWPPLTVIRQ
PVEEMAFRAT QYLIGALGKG GMRISDEIFD HQLVQRASIA PASA
//
