ID T5DB38_HELPX Unreviewed; 293 AA.
AC T5DB38;
DT 13-NOV-2013, integrated into UniProtKB/TrEMBL.
DT 13-NOV-2013, sequence version 1.
DT 24-JAN-2024, entry version 37.
DE RecName: Full=NodB homology domain-containing protein {ECO:0000259|PROSITE:PS51677};
GN ORFNames=N407_03835 {ECO:0000313|EMBL:EQL70529.1};
OS Helicobacter pylori FD662.
OC Bacteria; Campylobacterota; Epsilonproteobacteria; Campylobacterales;
OC Helicobacteraceae; Helicobacter.
OX NCBI_TaxID=1191284 {ECO:0000313|EMBL:EQL70529.1, ECO:0000313|Proteomes:UP000015970};
RN [1] {ECO:0000313|EMBL:EQL70529.1, ECO:0000313|Proteomes:UP000015970}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=FD662 {ECO:0000313|EMBL:EQL70529.1,
RC ECO:0000313|Proteomes:UP000015970};
RX PubMed=23012278; DOI=10.1128/JB.01278-12;
RA Gunaletchumy S.P., Teh X., Khosravi Y., Ramli N.S., Chua E.G., Kavitha T.,
RA Mason J.N., Lee H.T., Alias H., Zaidan N.Z., Yassin N.B., Tay L.C.,
RA Rudd S., Mitchell H.M., Kaakoush N.O., Loke M.F., Goh K.L., Vadivelu J.;
RT "Draft genome sequences of Helicobacter pylori isolates from Malaysia,
RT cultured from patients with functional dyspepsia and gastric cancer.";
RL J. Bacteriol. 194:5695-5696(2012).
RN [2] {ECO:0000313|EMBL:EQL70529.1, ECO:0000313|Proteomes:UP000015970}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=FD662 {ECO:0000313|EMBL:EQL70529.1,
RC ECO:0000313|Proteomes:UP000015970};
RX PubMed=24051312;
RA Rehvathy V., Tan M.H., Gunaletchumy S.P., Teh X., Wang S., Baybayan P.,
RA Singh S., Ashby M., Kaakoush N.O., Mitchell H.M., Croft L.J., Goh K.L.,
RA Loke M.F., Vadivelu J.;
RT "Multiple genome sequences of Helicobacter pylori strains of diverse
RT disease and antibiotic resistance backgrounds from malaysia.";
RL Genome Announc. 1:E00687-E00713(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EQL70529.1}.
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DR EMBL; AKHT02000007; EQL70529.1; -; Genomic_DNA.
DR RefSeq; WP_001040329.1; NZ_AKHT02000007.1.
DR AlphaFoldDB; T5DB38; -.
DR PATRIC; fig|1191284.5.peg.1448; -.
DR Proteomes; UP000015970; Unassembled WGS sequence.
DR GO; GO:0016810; F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds; IEA:InterPro.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR CDD; cd10938; CE4_HpPgdA_like; 1.
DR Gene3D; 3.20.20.370; Glycoside hydrolase/deacetylase; 1.
DR InterPro; IPR011330; Glyco_hydro/deAcase_b/a-brl.
DR InterPro; IPR002509; NODB_dom.
DR InterPro; IPR037950; PgdA-like.
DR PANTHER; PTHR47561; POLYSACCHARIDE DEACETYLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_6G05030); 1.
DR PANTHER; PTHR47561:SF1; POLYSACCHARIDE DEACETYLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_6G05030); 1.
DR Pfam; PF01522; Polysacc_deac_1; 1.
DR SUPFAM; SSF88713; Glycoside hydrolase/deacetylase; 1.
DR PROSITE; PS51677; NODB; 1.
PE 4: Predicted;
FT DOMAIN 29..235
FT /note="NodB homology"
FT /evidence="ECO:0000259|PROSITE:PS51677"
SQ SEQUENCE 293 AA; 33721 MW; 90D8FE62A416D9F3 CRC64;
MAKEILVAYG VDIDAVAGWL GSYGGEDSPD DISRGLFAGE VGIPRLLKLF KKYHLPATWF
APGHSIETFH EQMKMIVEAG HEVGAHGYSH ENPIAMSAKQ EEDVLLKSVE LIKDLTGKAP
TGYVAPWWEF SNITNELLLK HGFKYDHSLM HNDFTPYFVR VGDSWSKIDY SLEAKDWMKP
LIRGVETDLV EIPANWYLDD LPPMMFIKKS PNSFGFVSPH DIGQMWIDQF DWVYREMDYA
VFSMTIHPDV SGRPQVLLMH EKIIEHINKH DHVRWVTFNE IADDFLKRSP RKK
//
