ID U2YMF8_9SPHN Unreviewed; 263 AA.
AC U2YMF8;
DT 13-NOV-2013, integrated into UniProtKB/TrEMBL.
DT 13-NOV-2013, sequence version 1.
DT 27-MAR-2024, entry version 43.
DE SubName: Full=Putative LuxR family transcriptional regulator {ECO:0000313|EMBL:GAD49915.1};
GN ORFNames=NT2_06_03550 {ECO:0000313|EMBL:GAD49915.1};
OS Caenibius tardaugens NBRC 16725.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Erythrobacteraceae; Caenibius.
OX NCBI_TaxID=1219035 {ECO:0000313|EMBL:GAD49915.1, ECO:0000313|Proteomes:UP000016568};
RN [1] {ECO:0000313|EMBL:GAD49915.1, ECO:0000313|Proteomes:UP000016568}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NBRC 16725 {ECO:0000313|EMBL:GAD49915.1,
RC ECO:0000313|Proteomes:UP000016568};
RA Isaki S., Hosoyama A., Tsuchikane K., Katsumata H., Ando Y., Yamazaki S.,
RA Fujita N.;
RT "Whole genome shotgun sequence of Novosphingobium tardaugens NBRC 16725.";
RL Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAD49915.1}.
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DR EMBL; BASZ01000006; GAD49915.1; -; Genomic_DNA.
DR RefSeq; WP_021246285.1; NZ_CP034179.1.
DR AlphaFoldDB; U2YMF8; -.
DR KEGG; ntd:EGO55_17615; -.
DR eggNOG; COG2197; Bacteria.
DR OrthoDB; 3170288at2; -.
DR Proteomes; UP000016568; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd06170; LuxR_C_like; 1.
DR Gene3D; 3.30.450.80; Transcription factor LuxR-like, autoinducer-binding domain; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR016032; Sig_transdc_resp-reg_C-effctor.
DR InterPro; IPR005143; TF_LuxR_autoind-bd_dom.
DR InterPro; IPR036693; TF_LuxR_autoind-bd_dom_sf.
DR InterPro; IPR000792; Tscrpt_reg_LuxR_C.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR Pfam; PF03472; Autoind_bind; 1.
DR Pfam; PF00196; GerE; 1.
DR SMART; SM00421; HTH_LUXR; 1.
DR SUPFAM; SSF46894; C-terminal effector domain of the bipartite response regulators; 1.
DR SUPFAM; SSF75516; Pheromone-binding domain of LuxR-like quorum-sensing transcription factors; 1.
DR PROSITE; PS50043; HTH_LUXR_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000016568}.
FT DOMAIN 172..237
FT /note="HTH luxR-type"
FT /evidence="ECO:0000259|PROSITE:PS50043"
SQ SEQUENCE 263 AA; 29332 MW; FDB33FEFE5FFA4E1 CRC64;
MYVNARMRET LSRFNAASSM EALLAALADA ATKMGFPYVA MIQHGGLPRL VERALVITNY
PAEFVRFYTE SHAYVIDPVY EVSQLLDRPF SWDEIPGYVD LTGTQSALFE EARLHGLVHG
VTVPLHIPSE SHASCTFARA EPIMASPSLL TTLHIVAAFG FKAGLRLHHA SRGHDVPRLT
RREAQCTALV AVGKSDWEIS QILGLSETSV RYFVSHAKQR YGVYKRSELV ARALIDAQIL
RNDQGIIEAG PRRPRHRAKR RSP
//
