ID U2ZMC3_VIBPR Unreviewed; 671 AA.
AC U2ZMC3;
DT 13-NOV-2013, integrated into UniProtKB/TrEMBL.
DT 13-NOV-2013, sequence version 1.
DT 24-JAN-2024, entry version 35.
DE SubName: Full=Regulatory protein CsrD {ECO:0000313|EMBL:GAD68906.1};
GN Name=csrD {ECO:0000313|EMBL:GAD68906.1};
GN ORFNames=VPR01S_20_00860 {ECO:0000313|EMBL:GAD68906.1};
OS Vibrio proteolyticus NBRC 13287.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=1219065 {ECO:0000313|EMBL:GAD68906.1, ECO:0000313|Proteomes:UP000016570};
RN [1] {ECO:0000313|EMBL:GAD68906.1, ECO:0000313|Proteomes:UP000016570}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NBRC 13287 {ECO:0000313|EMBL:GAD68906.1,
RC ECO:0000313|Proteomes:UP000016570};
RA Isaki S., Hosoyama A., Numata M., Hashimoto M., Hosoyama Y., Tsuchikane K.,
RA Noguchi M., Hirakata S., Ichikawa N., Ohji S., Yamazoe A., Fujita N.;
RT "Whole genome shotgun sequence of Vibrio proteolyticus NBRC 13287.";
RL Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAD68906.1}.
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DR EMBL; BATJ01000020; GAD68906.1; -; Genomic_DNA.
DR RefSeq; WP_021706874.1; NZ_BATJ01000020.1.
DR AlphaFoldDB; U2ZMC3; -.
DR STRING; 1219065.VPR01S_20_00860; -.
DR eggNOG; COG2199; Bacteria.
DR eggNOG; COG2200; Bacteria.
DR Proteomes; UP000016570; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd01948; EAL; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR033423; GAPES4.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR PANTHER; PTHR33121; CYCLIC DI-GMP PHOSPHODIESTERASE PDEF; 1.
DR PANTHER; PTHR33121:SF32; RNASE E SPECIFICITY FACTOR CSRD; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF17157; GAPES4; 1.
DR Pfam; PF00990; GGDEF; 1.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00267; GGDEF; 1.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000016570};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..36
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 255..388
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 398..652
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
FT REGION 644..671
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 671 AA; 76881 MW; 023B7F5BAF74C1DF CRC64;
MRYTPTLKLS TRLVAFVTVI VISAMFILFI GGTLSFKRVG QEYLDHYLQG IVEVVDKEME
DPDAAYSMQR WMPKMLQASN IIEMQLSSPV GVVYRFKDTS SRIDEQLLYE KSFALERNSG
YQIAFKALPP YLGYSYSLEA LWSITLAVAL VIFCLMRGVK WLKEQLYGSE LLEERGRMIL
AGRVEEHAKG DEREWPYTAS EALDMLIEEL QDARQERSRF DTFIRSQTFL DQLTGTANRV
LFDSKLESTL SESGAYGGVM LLRINDWDSL CEENGKKAAD DFIVDVGEGL SNVLQRYPDV
ILSRYYDADF AIFIPHQGAK EVATIASNCL KQLEKITPPP PIDVEDWCHI GVSMYQEGER
RGRILDEAET ALKSAQLQRI NTWSRFQKSA NANLERGSVR WRTLFDQVLT PSKLQIYQQP
CYLLTSHKEL QLEHHELFAR IDDPERGILK ASRFNAAIES VGYETMLDKT VLISVIRHIK
QSPQRKPLSV NLYVQPFADK SYFKWFRDEL LQLPMDLRGM LTFEFSEARL VKHLDYMRPV
IRMIAGIGCK VCVGQAGRSI VSTYYLKDLK VDFLKLHRSL IKQIDQRHEN QLFVRSLIGA
CKGLKTQVIA VGVDSREEQD VLISLGVDGL QGRYLAAETP MLPEISPTPV TRRDTSSAKV
QPGRRNRWRR K
//
