ID U6DI23_NEOVI Unreviewed; 217 AA.
AC U6DI23;
DT 22-JAN-2014, integrated into UniProtKB/TrEMBL.
DT 22-JAN-2014, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE RecName: Full=DNA-directed RNA polymerase subunit {ECO:0000256|RuleBase:RU369086};
DE Flags: Fragment;
GN Name=RPA43 {ECO:0000313|EMBL:CCP82630.1};
OS Neovison vison (American mink) (Mustela vison).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae;
OC Mustelinae; Neogale.
OX NCBI_TaxID=452646 {ECO:0000313|EMBL:CCP82630.1};
RN [1] {ECO:0000313|EMBL:CCP82630.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Pool of brain {ECO:0000313|EMBL:CCP82630.1};
RA Anistoroaei R., Christensen K.;
RT "An American mink transcriptome.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: DNA-dependent RNA polymerase which catalyzes the
CC transcription of DNA into RNA using the four ribonucleoside
CC triphosphates as substrates. {ECO:0000256|RuleBase:RU369086}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000256|ARBA:ARBA00004604}.
CC -!- SIMILARITY: Belongs to the eukaryotic RPA43 RNA polymerase subunit
CC family. {ECO:0000256|ARBA:ARBA00005930}.
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DR EMBL; HAAF01010806; CCP82630.1; -; mRNA.
DR AlphaFoldDB; U6DI23; -.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:UniProtKB-UniRule.
DR CDD; cd04328; RNAP_I_Rpa43_N; 1.
DR Gene3D; 2.40.50.1060; -; 1.
DR Gene3D; 3.30.1490.120; RNA polymerase Rpb7-like, N-terminal domain; 1.
DR InterPro; IPR036898; RNA_pol_Rpb7-like_N_sf.
DR InterPro; IPR041901; RNAP_I_Rpa43_N.
DR InterPro; IPR041178; RPA43_OB.
DR InterPro; IPR045113; Rpb7-like.
DR InterPro; IPR005576; Rpb7-like_N.
DR PANTHER; PTHR12709:SF5; DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA43; 1.
DR PANTHER; PTHR12709; DNA-DIRECTED RNA POLYMERASE II, III; 1.
DR Pfam; PF17875; RPA43_OB; 1.
DR Pfam; PF03876; SHS2_Rpb7-N; 1.
PE 2: Evidence at transcript level;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478,
KW ECO:0000256|RuleBase:RU369086};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|RuleBase:RU369086};
KW Phosphoprotein {ECO:0000256|ARBA:ARBA00022553};
KW Transcription {ECO:0000256|ARBA:ARBA00023163,
KW ECO:0000256|RuleBase:RU369086}.
FT DOMAIN 38..93
FT /note="RNA polymerase Rpb7-like N-terminal"
FT /evidence="ECO:0000259|Pfam:PF03876"
FT DOMAIN 108..172
FT /note="RPA43 OB"
FT /evidence="ECO:0000259|Pfam:PF17875"
FT REGION 196..217
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:CCP82630.1"
FT NON_TER 217
FT /evidence="ECO:0000313|EMBL:CCP82630.1"
SQ SEQUENCE 217 AA; 23940 MW; 1162D017F5DF339D CRC64;
PVVGQAGVLP CLELPTYAAA CALVSSRYSC LVAGPHRRHI ALSPRYLNRK RTGIREQLDA
ELLRYSESLL GVPIAYDNIK VVGELGDIYD DQGHIHLNIE ADFVIFCPEP GQKLMGTINK
VSSSHIGCLV HGCFNASIPK PEHMPAEQWQ NLEINVGDEL EFEVFRLDSD AAGVFCIRGK
LNITSLQTKC SGVSEEITET GPEEITEKPL KKKKKKK
//