ID V4KF09_EUTSA Unreviewed; 500 AA.
AC V4KF09;
DT 22-JAN-2014, integrated into UniProtKB/TrEMBL.
DT 22-JAN-2014, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=EUTSA_v10009524mg {ECO:0000313|EMBL:ESQ36345.1};
OS Eutrema salsugineum (Saltwater cress) (Sisymbrium salsugineum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema.
OX NCBI_TaxID=72664 {ECO:0000313|EMBL:ESQ36345.1, ECO:0000313|Proteomes:UP000030689};
RN [1] {ECO:0000313|EMBL:ESQ36345.1, ECO:0000313|Proteomes:UP000030689}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23518688; DOI=10.3389/fpls.2013.00046;
RA Yang R., Jarvis D.E., Chen H., Beilstein M.A., Grimwood J., Jenkins J.,
RA Shu S., Prochnik S., Xin M., Ma C., Schmutz J., Wing R.A.,
RA Mitchell-Olds T., Schumaker K.S., Wang X.;
RT "The Reference Genome of the Halophytic Plant Eutrema salsugineum.";
RL Front. Plant Sci. 4:46-46(2013).
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DR EMBL; KI517683; ESQ36345.1; -; Genomic_DNA.
DR RefSeq; XP_006417992.1; XM_006417929.1.
DR AlphaFoldDB; V4KF09; -.
DR STRING; 72664.V4KF09; -.
DR EnsemblPlants; ESQ36345; ESQ36345; EUTSA_v10009524mg.
DR GeneID; 18994294; -.
DR Gramene; ESQ36345; ESQ36345; EUTSA_v10009524mg.
DR KEGG; eus:EUTSA_v10009524mg; -.
DR eggNOG; KOG4197; Eukaryota.
DR OMA; VDGYMRN; -.
DR OrthoDB; 405883at2759; -.
DR Proteomes; UP000030689; Unassembled WGS sequence.
DR GO; GO:0009507; C:chloroplast; IEA:EnsemblPlants.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0009451; P:RNA modification; IEA:EnsemblPlants.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 5.
DR PANTHER; PTHR47928:SF17; OS03G0441400 PROTEIN; 1.
DR PANTHER; PTHR47928; REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 3.
DR Pfam; PF13041; PPR_2; 3.
DR PROSITE; PS51375; PPR; 5.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000030689};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 212..234
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT REPEAT 41..75
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 145..175
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 176..210
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 246..276
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 277..311
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 500 AA; 55622 MW; 4BB93E8CDC32B1E0 CRC64;
MGLLPAVGFP SPAIPQRLPF VTRENQANPK IQKLNQSTSE TTVSWTSRIT LLSRNGRLAD
AAKEFSDMRL AGVEPNHITF IALLSGCGDF PSGSEALGDL LHGYACKLGL DRNHVMVGTA
ILGMYSKRGR FRKARLVFDY MEDKNSVTWN TMIDGYMRNG QVYDAVKMFD EMPDRDLISW
TAMMNGFVKK GFHEEALAWF REMQISGVEP DYVAIIAALA ACTNLGALSF GLWVHRYVMS
HDFKNNVRVS NSLIDLYCRC GCVEFARQVF DKMEKRTVVS WNSVIVGFAA NGNADESLVY
FRKMQEEGFK PDAVTFTGAL TACSHVGLVE EGLRYFQTMK RDYRISPRIE HYGCLVDLYS
RAGRLEDALK VVQSMPMKPN EVVIGSLLAA CRTNGNNAEL AERMMKHLSE LNVKSHSNYV
ILSNMYAADG KWEGASKMRG EMKGLGLKKQ PGFSSIEIDD CKHVFMAGDS AHVETASIRE
VLKLLQGCVV ETPAGDLLDG
//
