ID V4P6K7_EUTSA Unreviewed; 760 AA.
AC V4P6K7;
DT 22-JAN-2014, integrated into UniProtKB/TrEMBL.
DT 22-JAN-2014, sequence version 1.
DT 27-MAR-2024, entry version 44.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:ESQ55191.1};
GN ORFNames=EUTSA_v10024488mg {ECO:0000313|EMBL:ESQ55191.1};
OS Eutrema salsugineum (Saltwater cress) (Sisymbrium salsugineum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema.
OX NCBI_TaxID=72664 {ECO:0000313|EMBL:ESQ55191.1, ECO:0000313|Proteomes:UP000030689};
RN [1] {ECO:0000313|EMBL:ESQ55191.1, ECO:0000313|Proteomes:UP000030689}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23518688; DOI=10.3389/fpls.2013.00046;
RA Yang R., Jarvis D.E., Chen H., Beilstein M.A., Grimwood J., Jenkins J.,
RA Shu S., Prochnik S., Xin M., Ma C., Schmutz J., Wing R.A.,
RA Mitchell-Olds T., Schumaker K.S., Wang X.;
RT "The Reference Genome of the Halophytic Plant Eutrema salsugineum.";
RL Front. Plant Sci. 4:46-46(2013).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00108, ECO:0000256|RuleBase:RU000682}.
CC -!- SIMILARITY: Belongs to the HD-ZIP homeobox family. Class IV subfamily.
CC {ECO:0000256|ARBA:ARBA00006789}.
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DR EMBL; KI517384; ESQ55191.1; -; Genomic_DNA.
DR RefSeq; XP_006413738.1; XM_006413675.1.
DR AlphaFoldDB; V4P6K7; -.
DR STRING; 72664.V4P6K7; -.
DR EnsemblPlants; ESQ55191; ESQ55191; EUTSA_v10024488mg.
DR GeneID; 18028958; -.
DR Gramene; ESQ55191; ESQ55191; EUTSA_v10024488mg.
DR KEGG; eus:EUTSA_v10024488mg; -.
DR eggNOG; ENOG502QU3P; Eukaryota.
DR OMA; HIDNTWA; -.
DR OrthoDB; 3036383at2759; -.
DR Proteomes; UP000030689; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IEA:InterPro.
DR GO; GO:0008289; F:lipid binding; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:EnsemblPlants.
DR GO; GO:0048825; P:cotyledon development; IEA:EnsemblPlants.
DR GO; GO:0090627; P:plant epidermal cell differentiation; IEA:EnsemblPlants.
DR GO; GO:2000033; P:regulation of seed dormancy process; IEA:EnsemblPlants.
DR GO; GO:0010029; P:regulation of seed germination; IEA:EnsemblPlants.
DR GO; GO:0009845; P:seed germination; IEA:EnsemblPlants.
DR CDD; cd00086; homeodomain; 1.
DR CDD; cd08875; START_ArGLABRA2_like; 1.
DR Gene3D; 3.30.530.20; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR042160; GLABRA2/ANL2/PDF2/ATML1-like.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017970; Homeobox_CS.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR023393; START-like_dom_sf.
DR InterPro; IPR002913; START_lipid-bd_dom.
DR PANTHER; PTHR45654; HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1; 1.
DR PANTHER; PTHR45654:SF77; HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1; 1.
DR Pfam; PF00046; Homeodomain; 1.
DR Pfam; PF01852; START; 1.
DR SMART; SM00389; HOX; 1.
DR SMART; SM00234; START; 1.
DR SUPFAM; SSF55961; Bet v1-like; 2.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS00027; HOMEOBOX_1; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
DR PROSITE; PS50848; START; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Homeobox {ECO:0000256|ARBA:ARBA00023155, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00108}; Reference proteome {ECO:0000313|Proteomes:UP000030689}.
FT DOMAIN 60..120
FT /note="Homeobox"
FT /evidence="ECO:0000259|PROSITE:PS50071"
FT DOMAIN 254..485
FT /note="START"
FT /evidence="ECO:0000259|PROSITE:PS50848"
FT DNA_BIND 62..121
FT /note="Homeobox"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
FT REGION 15..70
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 119..146
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 26..40
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 760 AA; 83689 MW; B95680A94059385D CRC64;
MYHPNMFEPQ HHMFDMTPKI SDNDLGLTGS REDDFETKSG AEVTMENPLE EELQDPNQRP
NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRELS LEPLQVKFWF QNKRTQMKAQ
HERHENAILK SDNDKLRAEN NRYKDALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE
EIDRISSIAA KYVGKPLLTN STPFPQLTSS QHIPTRSLDL EVGNFGNSNN NQMGFVGEMY
GTTSDILRSV SIHSDADKPM IVELAVAAME ELVRMAQTGD PLWVSSDNSV EILNEEEYFR
TFPRGIGPKP IGLRSEASRE STVVIMNHIN LVEILMDVNQ WSSVFCGIVS RALTLEVLST
GVAGNYNGAL QVMTAEFQVP SPLVPTRENY FVRYCKQHSD NTWAVVDVSL DSLRPSPITR
SRRRPSGCLI QELQNGYSKV TWVEHTEVDD RSVHTMYKPL VNTGLAFGAK RWVATLDRQC
ERLASSMASN IPAADLSVIT SPEGRKSMLK LAERMVMSFC SGVGASTAHV WTTLTTTGSD
DVRVMTRKSM DDPGRPPGIV LSAATSFWLP VSPKRVFDFL RDENSRSEWD ILSNGGLVQE
MAHIANGRDP GNCVSLLRVN SVNSGQSNML ILQESCTDAS GSYVIYAPVD TMAMNVVLSG
GDPDYFALLP SGFAILPDGS VREGGNASVG AEGGGGGEGS NLDLVTSTAS NCGSLLTVAF
QILVDSVPTA KLSLGSVATV NSLIKCTVQR IKAALACDGA
//
