ID V5KD84_ECOLX Unreviewed; 903 AA.
AC V5KD84;
DT 19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT 19-FEB-2014, sequence version 1.
DT 27-MAR-2024, entry version 65.
DE SubName: Full=NikB {ECO:0000313|EMBL:AGW45081.1, ECO:0000313|EMBL:AIF77519.1};
DE SubName: Full=Relaxase {ECO:0000313|EMBL:OTE54761.1, ECO:0000313|EMBL:SPE07587.1};
GN Name=nikB {ECO:0000313|EMBL:AGW45081.1};
GN ORFNames=AW118_26230 {ECO:0000313|EMBL:OTE54761.1}, BER14_26205
GN {ECO:0000313|EMBL:PDV42225.1}, C9Z68_26330
GN {ECO:0000313|EMBL:TJQ06033.1}, RCS85_PII0014
GN {ECO:0000313|EMBL:SPE07587.1};
OS Escherichia coli.
OG Plasmid RCS85_pII {ECO:0000313|EMBL:SPE07587.1},
OG Plasmid pH2332-107 {ECO:0000313|EMBL:AIF77519.1},
OG Plasmid pO111-CRL-115 {ECO:0000313|EMBL:AGW45081.1},
OG Plasmid pO26-CRL-125 {ECO:0000313|EMBL:AGW45231.1},
OG Plasmid rcs85_pii {ECO:0000313|Proteomes:UP000309889}, and
OG Plasmid unnamed2 {ECO:0000313|EMBL:TJQ06033.1}.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=562 {ECO:0000313|EMBL:AGW45081.1};
RN [1] {ECO:0000313|EMBL:AGW45081.1}
RP NUCLEOTIDE SEQUENCE.
RC PLASMID=pO111-CRL-115 {ECO:0000313|EMBL:AGW45081.1}, and pO26-CRL-125
RC {ECO:0000313|EMBL:AGW45231.1};
RX PubMed=24223859;
RA Venturini C., Hassan K.A., Roy Chowdhury P., Paulsen I.T., Walker M.J.,
RA Djordjevic S.P.;
RT "Sequences of Two Related Multiple Antibiotic Resistance Virulence Plasmids
RT Sharing a Unique IS26-Related Molecular Signature Isolated from Different
RT Escherichia coli Pathotypes from Different Hosts.";
RL PLoS ONE 8:E78862-E78862(2013).
RN [2] {ECO:0000313|EMBL:AIF77519.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Human-2332 {ECO:0000313|EMBL:AIF77519.1};
RC PLASMID=pH2332-107 {ECO:0000313|EMBL:AIF77519.1};
RX PubMed=24920651; DOI=10.1093/jac/dku206;
RA Wang J., Stephan R., Power K., Yan Q., Hachler H., Fanning S.;
RT "Nucleotide sequences of 16 transmissible plasmids identified in nine
RT multidrug-resistant Escherichia coli isolates expressing an ESBL phenotype
RT isolated from food-producing animals and healthy humans.";
RL J. Antimicrob. Chemother. 69:2658-2668(2014).
RN [3] {ECO:0000313|EMBL:AGW45081.1}
RP NUCLEOTIDE SEQUENCE.
RC PLASMID=pO111-CRL-115 {ECO:0000313|EMBL:AGW45081.1}, and pO26-CRL-125
RC {ECO:0000313|EMBL:AGW45231.1};
RA Venturini C., Bhattacharya P., Hassan K.A., Paulsen I.T., Walker M.J.,
RA Djordjevic S.P.;
RT "Derivate Tn3 family transposons play a central role in the evolution of
RT multiple antibiotic resistance on virulence plasmids in enterohemorrhagic
RT Escherichia coli.";
RL Submitted (JAN-2014) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:PDV42225.1, ECO:0000313|Proteomes:UP000220499}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=OLC1334 {ECO:0000313|EMBL:PDV42225.1,
RC ECO:0000313|Proteomes:UP000220499};
RX PubMed=28221970; DOI=.4315/0362-028X.JFP-16-220;
RA Knowles M., Stinson S., Lambert D., Carrillo C., Koziol A., Gauthier M.,
RA Blais B.;
RT "Genomic Tools for Customized Recovery and Detection of Foodborne Shiga
RT Toxigenic Escherichia coli.";
RL J. Food Prot. 79:2066-2077(2016).
RN [5] {ECO:0000313|EMBL:OTE54761.1, ECO:0000313|Proteomes:UP000194376}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=OLC1269 {ECO:0000313|EMBL:OTE54761.1,
RC ECO:0000313|Proteomes:UP000194376};
RA Carrillo C.D., Koziol A.G., Mathews A., Goji N., Lambert D.,
RA Huszczynski G., Deschenes M., Gauthier M., Amoako K., Blais B.;
RT "Application of genomics in the determination of verotoxigenic Escherichia
RT coli toxin subtypes.";
RL Submitted (MAR-2017) to the EMBL/GenBank/DDBJ databases.
RN [6] {ECO:0000313|EMBL:PDV42225.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=OLC1334 {ECO:0000313|EMBL:PDV42225.1};
RA Ehlers B., Leendertz F.H.;
RL Submitted (SEP-2017) to the EMBL/GenBank/DDBJ databases.
RN [7] {ECO:0000313|EMBL:SPE07587.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=ECOR 3 {ECO:0000313|EMBL:SPE07587.1};
RA Cohen D.B., Kent A.D.;
RL Submitted (FEB-2018) to the EMBL/GenBank/DDBJ databases.
RN [8] {ECO:0000313|Proteomes:UP000309889}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ECOR 3 {ECO:0000313|Proteomes:UP000309889};
RC PLASMID=rcs85_pii {ECO:0000313|Proteomes:UP000309889};
RA Cea G.-C., William W.;
RL Submitted (FEB-2018) to the EMBL/GenBank/DDBJ databases.
RN [9] {ECO:0000313|EMBL:TJQ06033.1, ECO:0000313|Proteomes:UP000309937}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=FWSEC0118 {ECO:0000313|EMBL:TJQ06033.1,
RC ECO:0000313|Proteomes:UP000309937};
RC PLASMID=unnamed2 {ECO:0000313|EMBL:TJQ06033.1};
RA Tyson S., Peterson C.-L., Olson A., Tyler S., Cabral J., Lynch T., Knox N.,
RA Van Domselaar G., Graham M.;
RT "Food and Water Safety Consortium.";
RL Submitted (DEC-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; KC340959; AGW45081.1; -; Genomic_DNA.
DR EMBL; KC340960; AGW45231.1; -; Genomic_DNA.
DR EMBL; KJ484627; AIF77519.1; -; Genomic_DNA.
DR EMBL; NEOL01000072; OTE54761.1; -; Genomic_DNA.
DR EMBL; NWRY01000059; PDV42225.1; -; Genomic_DNA.
DR EMBL; LT985320; SPE07587.1; -; Genomic_DNA.
DR EMBL; RRGJ01000133; TJQ06033.1; -; Genomic_DNA.
DR RefSeq; WP_000991386.1; NZ_VTOT01000018.1.
DR RefSeq; YP_008864071.1; NC_022992.1.
DR RefSeq; YP_008864754.1; NC_022996.1.
DR RefSeq; YP_009068058.1; NC_025138.1.
DR PATRIC; fig|562.6983.peg.1720; -.
DR Proteomes; UP000194376; Unassembled WGS sequence.
DR Proteomes; UP000220499; Unassembled WGS sequence.
DR Proteomes; UP000309889; Plasmid rcs85_pii.
DR Proteomes; UP000309937; Unassembled WGS sequence.
DR InterPro; IPR005094; Endonuclease_MobA/VirD2.
DR Pfam; PF03432; Relaxase; 1.
PE 4: Predicted;
KW Plasmid {ECO:0000313|EMBL:AGW45081.1}.
FT DOMAIN 62..315
FT /note="MobA/VirD2-like nuclease"
FT /evidence="ECO:0000259|Pfam:PF03432"
FT REGION 881..903
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 903 AA; 104554 MW; 5C5F51B36F514F01 CRC64;
MNAIIPHKRR DGRSSFEDLI AYTSVRDDVQ ENELTEDSEI KSDVPHRNRF RRLVDYATRL
RNEKFVSLID VMKDGSQWVN FYGVTCFHNC NSLETAAEEM QYKADKAVFS RNDTDPVFHY
ILSWPAHESP RPEQLFDCVR HTLKSLELSK HQYVAAVHTD TDNLHVHVAV NRVHPETGYI
NWLSWSQEKL SRACRELELK HGFAPDNGCF VHAPGNRIVR KTALVRERRN AWRRGKKQTF
REYIAQMSIA GLREEPAQDW LSLHKRLASD GLYITMQEGE LVVKDGWDRA REGVALSSFG
PSWTAEKLGR KLGEYQPVPT DIFSQVGTPG RYDPEAINVD IRPEKVAETE SLKQYACRHF
AERLPEMARN GELESCLDVH RTLAKAGLWM GIQHGHLVLH DGFDKQQTPV RADSVWPLMT
LDYMQDLDGG WQPVPKDIFT QVIPGERFRG RNLGTQAVSD YEWYRMRMGT GPQGAIKREL
FSDKESLWGY TTVQCESLIE DMIAGGNFSW QACHEMFARK GLMLQKQHHG LVIVDAFNHE
LTPVKASSIH PDLTLSRAEP QAGPFEIAGA DIFERVKPEC RYNPELAASD EVEPGFRRDP
VLRRERREAR AAAREDLRAR YLVWKEHWRK PDLRYGERLR EIHAACRRRK AYIRVQFRDP
QLRKLHYHIA EVQRMQALIR LKESVKEERL SLIAEGKWYP LSYRQWVEQQ AVQGDRAALS
QLRGWDYRDR RKDKRRTTNA DRCVILCEPG GTPLYEDTGV LEARLQKDGS VRFRDRRNGE
LVCVDYGDRV VFYHHQDRNE LVDKLNLIAP VLFDREPGMG FEPEGSYQQF NDVFAEMVAW
HNAAGITGNG HFVISRPDVD LHRQRSEQYY HEYIRQQKSI SGGHGASYAP VQDNEWTPPS
PGM
//
