ID V7AWG8_PHAVU Unreviewed; 505 AA.
AC V7AWG8;
DT 19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT 19-FEB-2014, sequence version 1.
DT 24-JAN-2024, entry version 34.
DE RecName: Full=TFIIS N-terminal domain-containing protein {ECO:0000259|PROSITE:PS51319};
GN ORFNames=PHAVU_009G172500g {ECO:0000313|EMBL:ESW09992.1};
OS Phaseolus vulgaris (Kidney bean) (French bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Phaseolus.
OX NCBI_TaxID=3885 {ECO:0000313|EMBL:ESW09992.1, ECO:0000313|Proteomes:UP000000226};
RN [1] {ECO:0000313|Proteomes:UP000000226}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. G19833 {ECO:0000313|Proteomes:UP000000226};
RX PubMed=24908249; DOI=10.1038/ng.3008;
RA Schmutz J., McClean P.E., Mamidi S., Wu G.A., Cannon S.B., Grimwood J.,
RA Jenkins J., Shu S., Song Q., Chavarro C., Torres-Torres M., Geffroy V.,
RA Moghaddam S.M., Gao D., Abernathy B., Barry K., Blair M., Brick M.A.,
RA Chovatia M., Gepts P., Goodstein D.M., Gonzales M., Hellsten U.,
RA Hyten D.L., Jia G., Kelly J.D., Kudrna D., Lee R., Richard M.M.,
RA Miklas P.N., Osorno J.M., Rodrigues J., Thareau V., Urrea C.A., Wang M.,
RA Yu Y., Zhang M., Wing R.A., Cregan P.B., Rokhsar D.S., Jackson S.A.;
RT "A reference genome for common bean and genome-wide analysis of dual
RT domestications.";
RL Nat. Genet. 46:707-713(2014).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|PROSITE-ProRule:PRU00649}.
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DR EMBL; CM002296; ESW09992.1; -; Genomic_DNA.
DR RefSeq; XP_007137998.1; XM_007137936.1.
DR AlphaFoldDB; V7AWG8; -.
DR STRING; 3885.V7AWG8; -.
DR EnsemblPlants; ESW09992; ESW09992; PHAVU_009G172500g.
DR GeneID; 18620445; -.
DR Gramene; ESW09992; ESW09992; PHAVU_009G172500g.
DR KEGG; pvu:PHAVU_009G172500g; -.
DR eggNOG; KOG1793; Eukaryota.
DR OMA; AFDEYME; -.
DR OrthoDB; 12240at2759; -.
DR Proteomes; UP000000226; Chromosome 9.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0009742; P:brassinosteroid mediated signaling pathway; IEA:InterPro.
DR GO; GO:0032784; P:regulation of DNA-templated transcription elongation; IEA:InterPro.
DR Gene3D; 1.20.930.10; Conserved domain common to transcription factors TFIIS, elongin A, CRSP70; 1.
DR InterPro; IPR044204; IWS1/2.
DR InterPro; IPR035441; TFIIS/LEDGF_dom_sf.
DR InterPro; IPR017923; TFIIS_N.
DR PANTHER; PTHR47350; PROTEIN IWS1 HOMOLOG 1; 1.
DR PANTHER; PTHR47350:SF4; PROTEIN IWS1 HOMOLOG 1; 1.
DR Pfam; PF08711; Med26; 1.
DR SUPFAM; SSF47676; Conserved domain common to transcription factors TFIIS, elongin A, CRSP70; 1.
DR PROSITE; PS51319; TFIIS_N; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|PROSITE-ProRule:PRU00649};
KW Reference proteome {ECO:0000313|Proteomes:UP000000226}.
FT DOMAIN 295..378
FT /note="TFIIS N-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51319"
FT REGION 1..216
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 394..448
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 463..490
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..66
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 99..129
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 145..182
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 417..437
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 505 AA; 57461 MW; AB45DEDB49E19F9C CRC64;
MGYEDNPYRD EDGEPLMDYD DVQSDREPSP EPRHQLDDYE DDVNDEWRGR DRSQTPVYDN
DAARSKPRKR LIKKSVAGKQ SVAAELEDEE EEGYVPEARF DEEDGRKRKK GKEVGSGKKE
KRLKGEQRFG SGDGSKFGGS KKGFGGKAGK DHDGEVKEMW DTIAGGDSED DHDGVRDLDD
DNFIDDTGVE PAYYGSDEPR SPGDAPQAEE GEEDSEMKDL FKIGKKRKKN ERSPAEIALL
VENVMAELEV TAEEDADLNR QGKPAINKLK KLTLLTEVLS KKQLQLEFLD HGVLTLLKNW
LEPLPDGSLP NINIRMEILR ILNEFPIDLE QYDRREQLKK SGLGKVIMFL SKSDEEISVN
RKLAKELVDK WSRPIFNKST RFEDMRNVED DRVTYRRPSV KKPTNKVAGI SRDSDLDLEI
SQPTTAGQSS SRQHASRPEA TPLDFVIRPQ SKIDPDEIRA RAKQAAQDQQ RMKMNKKLQQ
LRAPKKRQLQ ATKLSVEGRG MVKYL
//
