ID V7B6V7_PHAVU Unreviewed; 418 AA.
AC V7B6V7;
DT 19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT 19-FEB-2014, sequence version 1.
DT 27-MAR-2024, entry version 48.
DE RecName: Full=E3 ubiquitin-protein ligase PRT1 {ECO:0008006|Google:ProtNLM};
GN ORFNames=PHAVU_008G125500g {ECO:0000313|EMBL:ESW12588.1};
OS Phaseolus vulgaris (Kidney bean) (French bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Phaseolus.
OX NCBI_TaxID=3885 {ECO:0000313|EMBL:ESW12588.1, ECO:0000313|Proteomes:UP000000226};
RN [1] {ECO:0000313|Proteomes:UP000000226}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. G19833 {ECO:0000313|Proteomes:UP000000226};
RX PubMed=24908249; DOI=10.1038/ng.3008;
RA Schmutz J., McClean P.E., Mamidi S., Wu G.A., Cannon S.B., Grimwood J.,
RA Jenkins J., Shu S., Song Q., Chavarro C., Torres-Torres M., Geffroy V.,
RA Moghaddam S.M., Gao D., Abernathy B., Barry K., Blair M., Brick M.A.,
RA Chovatia M., Gepts P., Goodstein D.M., Gonzales M., Hellsten U.,
RA Hyten D.L., Jia G., Kelly J.D., Kudrna D., Lee R., Richard M.M.,
RA Miklas P.N., Osorno J.M., Rodrigues J., Thareau V., Urrea C.A., Wang M.,
RA Yu Y., Zhang M., Wing R.A., Cregan P.B., Rokhsar D.S., Jackson S.A.;
RT "A reference genome for common bean and genome-wide analysis of dual
RT domestications.";
RL Nat. Genet. 46:707-713(2014).
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DR EMBL; CM002295; ESW12588.1; -; Genomic_DNA.
DR RefSeq; XP_007140594.1; XM_007140532.1.
DR AlphaFoldDB; V7B6V7; -.
DR STRING; 3885.V7B6V7; -.
DR EnsemblPlants; ESW12588; ESW12588; PHAVU_008G125500g.
DR GeneID; 18622679; -.
DR Gramene; ESW12588; ESW12588; PHAVU_008G125500g.
DR KEGG; pvu:PHAVU_008G125500g; -.
DR eggNOG; KOG4159; Eukaryota.
DR eggNOG; KOG4582; Eukaryota.
DR OMA; GDCYNTR; -.
DR OrthoDB; 56861at2759; -.
DR PhylomeDB; V7B6V7; -.
DR Proteomes; UP000000226; Chromosome 8.
DR GO; GO:0016746; F:acyltransferase activity; IEA:UniProt.
DR GO; GO:0140096; F:catalytic activity, acting on a protein; IEA:UniProt.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 3.30.60.90; -; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 2.
DR InterPro; IPR027370; Znf-RING_euk.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR InterPro; IPR000433; Znf_ZZ.
DR InterPro; IPR043145; Znf_ZZ_sf.
DR PANTHER; PTHR15898:SF13; RING FINGER PROTEIN PSH1; 1.
DR PANTHER; PTHR15898; UNCHARACTERIZED; 1.
DR Pfam; PF13445; zf-RING_UBOX; 1.
DR Pfam; PF00569; ZZ; 1.
DR SMART; SM00184; RING; 2.
DR SMART; SM00291; ZnF_ZZ; 1.
DR SUPFAM; SSF57850; RING/U-box; 3.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 2.
DR PROSITE; PS50135; ZF_ZZ_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000000226};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00228}.
FT DOMAIN 25..65
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 196..235
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 305..369
FT /note="ZZ-type"
FT /evidence="ECO:0000259|PROSITE:PS50135"
SQ SEQUENCE 418 AA; 47321 MW; 22E67F24791D8CF2 CRC64;
MENNAFRDRN FADDEHEEIP ESFVCCVCLD LLYKPIVLSC GHICCFWCVY NSMNCLRESQ
CPVCRHQYYH FPTVCQLLHF LLLKIYTVAY KRREDQTLEE EKKSGFYSPQ FDPDTCESQA
KFGHSGIPSS SSVTNLTSNS CNVGTSECTE QSGSTTHERD EGIVYSNGEA DIAGTPAQTQ
EEISLQQKLS VADVTCTMCK QMLFRPVVLN CGHVYCQTCV VNNTDDDTLR CRVCQSPHPR
RFPKVCLELD HFLEEQLPEE YRQRRDAIEL KQIKVKLETT PSCSLDKGNK GENKDWWSDP
DSKVHIGVGC DFCGMFPIIG DRYRCADCTE KMGFDLCGDC YATRSKLPGR FNQQHTSEHK
FKLEQSNIMH NIMLRLATAQ LGDTSIDLES VGNLEIASDG PTLFDDAVDN HSDSEATN
//
