ID V7BKM0_PHAVU Unreviewed; 477 AA.
AC V7BKM0;
DT 19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT 19-FEB-2014, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
DE Flags: Fragment;
GN ORFNames=PHAVU_006G0477001g {ECO:0000313|EMBL:ESW18512.1};
OS Phaseolus vulgaris (Kidney bean) (French bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Phaseolus.
OX NCBI_TaxID=3885 {ECO:0000313|EMBL:ESW18512.1, ECO:0000313|Proteomes:UP000000226};
RN [1] {ECO:0000313|Proteomes:UP000000226}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. G19833 {ECO:0000313|Proteomes:UP000000226};
RX PubMed=24908249; DOI=10.1038/ng.3008;
RA Schmutz J., McClean P.E., Mamidi S., Wu G.A., Cannon S.B., Grimwood J.,
RA Jenkins J., Shu S., Song Q., Chavarro C., Torres-Torres M., Geffroy V.,
RA Moghaddam S.M., Gao D., Abernathy B., Barry K., Blair M., Brick M.A.,
RA Chovatia M., Gepts P., Goodstein D.M., Gonzales M., Hellsten U.,
RA Hyten D.L., Jia G., Kelly J.D., Kudrna D., Lee R., Richard M.M.,
RA Miklas P.N., Osorno J.M., Rodrigues J., Thareau V., Urrea C.A., Wang M.,
RA Yu Y., Zhang M., Wing R.A., Cregan P.B., Rokhsar D.S., Jackson S.A.;
RT "A reference genome for common bean and genome-wide analysis of dual
RT domestications.";
RL Nat. Genet. 46:707-713(2014).
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC {ECO:0000256|ARBA:ARBA00006643}.
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DR EMBL; CM002293; ESW18512.1; -; Genomic_DNA.
DR RefSeq; XP_007146518.1; XM_007146456.1.
DR AlphaFoldDB; V7BKM0; -.
DR EnsemblPlants; ESW18512; ESW18512; PHAVU_006G0477001g.
DR GeneID; 18627798; -.
DR Gramene; ESW18512; ESW18512; PHAVU_006G0477001g.
DR KEGG; pvu:PHAVU_006G0477001; -.
DR eggNOG; KOG4197; Eukaryota.
DR OMA; EPNCRIW; -.
DR OrthoDB; 1214966at2759; -.
DR Proteomes; UP000000226; Chromosome 6.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 3.
DR PANTHER; PTHR24015:SF1672; OS06G0506100 PROTEIN; 1.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF13041; PPR_2; 2.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 4.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000000226};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 18..52
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 53..83
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 84..118
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 186..220
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 384..477
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:ESW18512.1"
SQ SEQUENCE 477 AA; 54162 MW; 4D90913897913E39 CRC64;
CGDIDRARWL FDRMINKNVV SWNLMISGYV KLGKPDECIH LFDEMQLSTL KPDIVTFSNV
LNAYFQCGRV DDARNIFSKL PKIDEICWTT MIVGYAQNGR DEDSLMLFGD MLRRNVKLDN
YNTISSVISS GAKLASLHHG QVVHGKVILV GIEKDMLVLS ALVDMYSKCG ITLDAWVVFE
TMPIRNIITW NAMILGYAQN GQVPEALALY ERMQLENFKP DNITFVAKYF DAISEQGMTP
TLDHYACMVT LLGRSGRIDK AVDLIQGMPH KPNCRIWSTL LSVCAKTNLK SAELAANYLF
ELEPHNAGPY IMLSNLYAAC GRWKDVAVVR SLMKEKSAKK FAAYSWVEVG NEVHRFVSED
HSHLEAGKIY GELNRLISIL QNIGYNPDIN IVLHNVGEKE KFRSISYHSE KLALAFALIR
KPNGVEPIRI IKNIRVCDDC HVFMKFASIT IGRPIIMRDS NRFHHFFDGK CSCKDNW
//
