ID V7BMI9_PHAVU Unreviewed; 1906 AA.
AC V7BMI9;
DT 19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT 19-FEB-2014, sequence version 1.
DT 24-JAN-2024, entry version 44.
DE RecName: Full=S1 motif domain-containing protein {ECO:0000259|PROSITE:PS50126};
GN ORFNames=PHAVU_007G270000g {ECO:0000313|EMBL:ESW17806.1};
OS Phaseolus vulgaris (Kidney bean) (French bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Phaseolus.
OX NCBI_TaxID=3885 {ECO:0000313|EMBL:ESW17806.1, ECO:0000313|Proteomes:UP000000226};
RN [1] {ECO:0000313|Proteomes:UP000000226}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. G19833 {ECO:0000313|Proteomes:UP000000226};
RX PubMed=24908249; DOI=10.1038/ng.3008;
RA Schmutz J., McClean P.E., Mamidi S., Wu G.A., Cannon S.B., Grimwood J.,
RA Jenkins J., Shu S., Song Q., Chavarro C., Torres-Torres M., Geffroy V.,
RA Moghaddam S.M., Gao D., Abernathy B., Barry K., Blair M., Brick M.A.,
RA Chovatia M., Gepts P., Goodstein D.M., Gonzales M., Hellsten U.,
RA Hyten D.L., Jia G., Kelly J.D., Kudrna D., Lee R., Richard M.M.,
RA Miklas P.N., Osorno J.M., Rodrigues J., Thareau V., Urrea C.A., Wang M.,
RA Yu Y., Zhang M., Wing R.A., Cregan P.B., Rokhsar D.S., Jackson S.A.;
RT "A reference genome for common bean and genome-wide analysis of dual
RT domestications.";
RL Nat. Genet. 46:707-713(2014).
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000256|ARBA:ARBA00004604}.
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DR EMBL; CM002294; ESW17806.1; -; Genomic_DNA.
DR RefSeq; XP_007145812.1; XM_007145750.1.
DR SMR; V7BMI9; -.
DR STRING; 3885.V7BMI9; -.
DR EnsemblPlants; ESW17806; ESW17806; PHAVU_007G270000g.
DR GeneID; 18627187; -.
DR Gramene; ESW17806; ESW17806; PHAVU_007G270000g.
DR KEGG; pvu:PHAVU_007G270000g; -.
DR eggNOG; KOG1070; Eukaryota.
DR OMA; GQYLRAY; -.
DR OrthoDB; 167902at2759; -.
DR Proteomes; UP000000226; Chromosome 7.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 10.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR InterPro; IPR003107; HAT.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR045209; Rrp5.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR008847; Suf.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR PANTHER; PTHR23270; PROGRAMMED CELL DEATH PROTEIN 11 PRE-RRNA PROCESSING PROTEIN RRP5; 1.
DR PANTHER; PTHR23270:SF10; PROTEIN RRP5 HOMOLOG; 1.
DR Pfam; PF00575; S1; 5.
DR Pfam; PF05843; Suf; 1.
DR SMART; SM00386; HAT; 6.
DR SMART; SM00316; S1; 14.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 11.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS50126; S1; 13.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000226};
KW rRNA processing {ECO:0000256|ARBA:ARBA00022552}.
FT DOMAIN 127..209
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 225..291
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 314..384
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 400..474
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 491..558
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 578..647
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 754..823
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 867..931
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 1051..1127
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 1149..1220
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 1249..1323
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 1356..1425
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 1446..1516
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT REGION 1..86
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 10..56
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1906 AA; 213631 MW; 53D8E6807F3519DD CRC64;
MAPPKRTQMK VSGDKPKIDK ASKKIFKRKE KKQNDAAATK SEKLPLQLED EVPDFPRGGE
VFANPRNDYD EFGGENHSRK TKKNKRRKAL IKSNEAVDDW GSLSGEGITG KLPRRVNKIT
LKNITPGMKL WGVVAEVNEK DLVVSLPGGL RGLVHSADAV DPIFDDAIEV GENFLTGVFN
VGQLVSCVVL RLDDDNKERG RRKIWLSLRL SLLHKNYNLD VVQEGMVLAA YVNSIEDHGY
ILHFGVSSFM GFLPKDSSTE GPGGEVKIGK LLQGLVRSID KVRKVVYLSS DPDTISKSLT
KDLRGLSIDL LVPGMMVNAR VKSILENGVM LSFLTYFTGT VDLFHLQNIY PGTNWKDKYS
ESLKVVSRVL FIDPSSRSVG LTLNPYLVLN RAPPSNVKIG DIYDDSKVVR VDKGSGLLLE
VPSIPEPTPA FVSISDIAEE EIQKLEKKFK EGNHVRVRIL GLRYLEGIAT GVLKASALEE
EVFTHSDVKP GMVLKAKILS VDSFGAIVQI PGGVKALCPL RHMSELEISK PGKKFKVGAE
LIFRVLGCKS KRVTVTHKKT LVKSKLGIIS SYVDATDGLI THGWITKIEV NGCFVRFYNG
VHGYAPRFEL GLEPGADPGT VYNVGQVVKC RVISSIPASR RIILSFMIKA SRVSEDVMVT
LGSLVSGVVD RITSVNIVVR VNASSFSGGT ISMEHLADHH GQAILMNKLL KPGYKFDQLL
VLDVKGSNLI LSAKSSLVKH AQQIPSDINQ IQPNSVVNGY ICNIIESGCF VRFLGHLTGF
APRNKAVEDQ KANILEAYYI GQSVRSNISN VSSETGRVTL SLKQIDCSST DASFIQEYFL
MDEKIANIQN LDSGASDLKW LEGFNIGAVA KGKVKDVADV GLVLSFEEHN DVFGFITNYQ
LAGTVLESGS EVEALVLDVA KAERLVDLTL KPEFFNSSKE SSRSRTDKKK RRREPSKELV
LHQTVKAVVE IVKENYMVVS IPENDYLVGY ASISDYNTQR FPHKYQNGQS VTATVMALPS
PETSGRLLLL LNEVNETASS KRSKKSSYKV GTLVEAEITD INMFELKVKF GFGRHGRIHI
TEVHNGNDLK NPFSSYKIGQ TVTARIVAKP NARNGNWKGS QWELSVRPEM VTGSSDIDDV
SGNFEFIIGQ CVAGYVYKVE REWVSLTISR NVRAQIYILY SATEPSELEG FQKRFHVGQH
VSGHVLSFNS EKTVLQLVLC PFLNLTCRTN EEPQYNVVDK DLTAYVHEGD ILGGRVSKIF
PGVGGLRVQV GPRTYGKVHF TEIADSWVPD PLSGYHEGQF VKCVVLEIIH TVKGSIHVEL
SLRSSSVKLS QDSVDVQSIV DANDKRVEKI EDLHLGMIVK GYIKTVTPKG CFIFLSRKID
AKILLSNLSN QYVEELEKEF PIGKLVTGRV ISVEPLSSRV EVTLKTSPVL HTSKSDIIDF
SKLHVGDIIS GSIKRVESFG LFIAIDNTNM VGLCHVSEIY DNQIENIEAN YKPGDRVNAK
ILKVDEERHR ISLGMKSSHM RDRTLLQIAS KDELFEDVMK SITSTHSFLK TSNLDVEDEI
NQFPILSRAE DRGDIPPLDV SLDDFDQIDV NNANSHSEEN ANEEVIIKEK HKRHEKKKAK
EEREKQIRAA EERLLEEDIP RTADEFEKLI RSSPNSSFIW INYMDFMISM AAVEKARSIA
ERALMTINIR EENEKLNIWK AYFNLENKYG NPREEAVMKV FQRALQYNDP KKVYLALLGM
FERTEQHNLA DDLLNKMTKK FKHSCKVWLR RIQSLLNQNQ DEIQPLIDRA SLSLPKHKHI
KFFSQTAILE FKAGVPDRGR SLFEKILREY PKRTDLWSVY LDQEIQHKDE DIIRALFERA
VSLSLPPKKM KFLFKKYLDY EKSQGDDERI ESVKRKAMEY VETTLS
//
