GenomeNet

Database: UniProt
Entry: V7CFS6_PHAVU
LinkDB: V7CFS6_PHAVU
Original site: V7CFS6_PHAVU 
ID   V7CFS6_PHAVU            Unreviewed;       790 AA.
AC   V7CFS6;
DT   19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT   19-FEB-2014, sequence version 1.
DT   24-JAN-2024, entry version 35.
DE   RecName: Full=K Homology domain-containing protein {ECO:0000259|SMART:SM00322};
GN   ORFNames=PHAVU_002G036300g {ECO:0000313|EMBL:ESW29009.1};
OS   Phaseolus vulgaris (Kidney bean) (French bean).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC   NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Phaseolus.
OX   NCBI_TaxID=3885 {ECO:0000313|EMBL:ESW29009.1, ECO:0000313|Proteomes:UP000000226};
RN   [1] {ECO:0000313|Proteomes:UP000000226}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. G19833 {ECO:0000313|Proteomes:UP000000226};
RX   PubMed=24908249; DOI=10.1038/ng.3008;
RA   Schmutz J., McClean P.E., Mamidi S., Wu G.A., Cannon S.B., Grimwood J.,
RA   Jenkins J., Shu S., Song Q., Chavarro C., Torres-Torres M., Geffroy V.,
RA   Moghaddam S.M., Gao D., Abernathy B., Barry K., Blair M., Brick M.A.,
RA   Chovatia M., Gepts P., Goodstein D.M., Gonzales M., Hellsten U.,
RA   Hyten D.L., Jia G., Kelly J.D., Kudrna D., Lee R., Richard M.M.,
RA   Miklas P.N., Osorno J.M., Rodrigues J., Thareau V., Urrea C.A., Wang M.,
RA   Yu Y., Zhang M., Wing R.A., Cregan P.B., Rokhsar D.S., Jackson S.A.;
RT   "A reference genome for common bean and genome-wide analysis of dual
RT   domestications.";
RL   Nat. Genet. 46:707-713(2014).
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DR   EMBL; CM002289; ESW29009.1; -; Genomic_DNA.
DR   RefSeq; XP_007157015.1; XM_007156953.1.
DR   AlphaFoldDB; V7CFS6; -.
DR   STRING; 3885.V7CFS6; -.
DR   EnsemblPlants; ESW29009; ESW29009; PHAVU_002G036300g.
DR   GeneID; 18636844; -.
DR   Gramene; ESW29009; ESW29009; PHAVU_002G036300g.
DR   KEGG; pvu:PHAVU_002G036300g; -.
DR   eggNOG; KOG1676; Eukaryota.
DR   OMA; PEMEGVQ; -.
DR   OrthoDB; 1662at2759; -.
DR   Proteomes; UP000000226; Chromosome 2.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR   CDD; cd00105; KH-I; 1.
DR   Gene3D; 3.30.1370.10; K Homology domain, type 1; 2.
DR   InterPro; IPR004087; KH_dom.
DR   InterPro; IPR004088; KH_dom_type_1.
DR   InterPro; IPR036612; KH_dom_type_1_sf.
DR   PANTHER; PTHR10288; KH DOMAIN CONTAINING RNA BINDING PROTEIN; 1.
DR   PANTHER; PTHR10288:SF145; KH DOMAIN-CONTAINING PROTEIN; 1.
DR   Pfam; PF00013; KH_1; 2.
DR   SMART; SM00322; KH; 2.
DR   SUPFAM; SSF54791; Eukaryotic type KH-domain (KH-domain type I); 2.
DR   PROSITE; PS50084; KH_TYPE_1; 2.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000000226};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00117}.
FT   DOMAIN          195..268
FT                   /note="K Homology"
FT                   /evidence="ECO:0000259|SMART:SM00322"
FT   DOMAIN          291..365
FT                   /note="K Homology"
FT                   /evidence="ECO:0000259|SMART:SM00322"
FT   REGION          1..198
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          367..790
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        28..43
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        50..94
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        100..117
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        120..157
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        178..198
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        477..496
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        497..528
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        548..569
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        578..594
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        605..640
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        654..672
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        683..706
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        719..756
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   790 AA;  84324 MW;  749685E4A13516F9 CRC64;
     MAEEEVAAPA GSPVPSDHKR KLEDLQPETT ESNANSKTNS DGETADAAVP GETENKRPRL
     DDQQDVPADT NGHQDEQVAE QEKETEERSA LEDANPDLDQ TMTKDPSEVT VVQQPSGEDS
     EPADAKELPV EDAGHELVEE PSKETQQESK DSTEQDTSSG DKQPSAVETA LHSVEVPYNK
     QDASSEQKQS TSEAEVTTRK IEVPNNKVGV LIGKAGDTIR YLQYNSGAKI QITRDADSDP
     HCATRSVELI GSLESIDKAE KLMTAVIAEA DAGGSPSLVA RGLSPAQATV GSEQIQIQVP
     NEKVGLIIGR GGETIKSLQT KSGARIQLIP QHLPEGDDSK ERTVQVTGDK RQIEIAQELI
     KEVMNQPIRP SSGGFGQQAY RPPRGSGGPP QWGQRGSHFG HPTAYDYQHR GPYPSHNQPY
     ASPYGNYPQH MAPRSNFGSG WEQRPHHSFQ APPPHNGGYE YYGGQGGHLS DAPPSTQLPS
     SAPPHGTGPS PLPSMGPAPT QVNYNYGQPQ SQDYGHQTAY SQAGLPQQGY GQGYDESKYE
     NRAPTQHPYA GHVNSQTTYQ QTGAQPNYPA HQQYGKPPLY GMSSQGQPQQ SYGHPRAAQP
     GEMQYQASAP AQSYGTNVPA QQPYPYAVSG PSQTAYPSYG SAPTADGYSH PQPASGAPYT
     QPQPSYGQPA AQPAASYAQV GPTGYGSYPS AQPSYPEQQA PNNAVYGYQA PQDPGYSTGA
     APAYSTAQPS GQPGYVQPTQ TQTGYEQSNT QSAGYGAVPA TAPAAYGKTL SPQPTAYPQY
     DSTQVYGAPR
//
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