ID V7CU42_PHAVU Unreviewed; 862 AA.
AC V7CU42;
DT 19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT 19-FEB-2014, sequence version 1.
DT 24-JAN-2024, entry version 37.
DE RecName: Full=MIF4G domain-containing protein {ECO:0000259|SMART:SM00543};
GN ORFNames=PHAVU_001G086100g {ECO:0000313|EMBL:ESW33634.1};
OS Phaseolus vulgaris (Kidney bean) (French bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Phaseolus.
OX NCBI_TaxID=3885 {ECO:0000313|EMBL:ESW33634.1, ECO:0000313|Proteomes:UP000000226};
RN [1] {ECO:0000313|Proteomes:UP000000226}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. G19833 {ECO:0000313|Proteomes:UP000000226};
RX PubMed=24908249; DOI=10.1038/ng.3008;
RA Schmutz J., McClean P.E., Mamidi S., Wu G.A., Cannon S.B., Grimwood J.,
RA Jenkins J., Shu S., Song Q., Chavarro C., Torres-Torres M., Geffroy V.,
RA Moghaddam S.M., Gao D., Abernathy B., Barry K., Blair M., Brick M.A.,
RA Chovatia M., Gepts P., Goodstein D.M., Gonzales M., Hellsten U.,
RA Hyten D.L., Jia G., Kelly J.D., Kudrna D., Lee R., Richard M.M.,
RA Miklas P.N., Osorno J.M., Rodrigues J., Thareau V., Urrea C.A., Wang M.,
RA Yu Y., Zhang M., Wing R.A., Cregan P.B., Rokhsar D.S., Jackson S.A.;
RT "A reference genome for common bean and genome-wide analysis of dual
RT domestications.";
RL Nat. Genet. 46:707-713(2014).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the NCBP1 family.
CC {ECO:0000256|ARBA:ARBA00007413}.
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DR EMBL; CM002288; ESW33634.1; -; Genomic_DNA.
DR RefSeq; XP_007161640.1; XM_007161578.1.
DR AlphaFoldDB; V7CU42; -.
DR STRING; 3885.V7CU42; -.
DR EnsemblPlants; ESW33634; ESW33634; PHAVU_001G086100g.
DR GeneID; 18640798; -.
DR Gramene; ESW33634; ESW33634; PHAVU_001G086100g.
DR KEGG; pvu:PHAVU_001G086100g; -.
DR eggNOG; KOG1104; Eukaryota.
DR OMA; CAAEGLM; -.
DR OrthoDB; 5477544at2759; -.
DR PhylomeDB; V7CU42; -.
DR Proteomes; UP000000226; Chromosome 1.
DR GO; GO:0005845; C:mRNA cap binding complex; IEA:EnsemblPlants.
DR GO; GO:0005846; C:nuclear cap binding complex; IEA:EnsemblPlants.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000339; F:RNA cap binding; IEA:EnsemblPlants.
DR GO; GO:1901527; P:abscisic acid-activated signaling pathway involved in stomatal movement; IEA:EnsemblPlants.
DR GO; GO:0000380; P:alternative mRNA splicing, via spliceosome; IEA:EnsemblPlants.
DR GO; GO:0051607; P:defense response to virus; IEA:EnsemblPlants.
DR GO; GO:0048574; P:long-day photoperiodism, flowering; IEA:EnsemblPlants.
DR GO; GO:0006406; P:mRNA export from nucleus; IEA:InterPro.
DR GO; GO:0031053; P:primary miRNA processing; IEA:EnsemblPlants.
DR GO; GO:0000394; P:RNA splicing, via endonucleolytic cleavage and ligation; IEA:EnsemblPlants.
DR Gene3D; 1.25.40.180; -; 3.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR027159; CBP80.
DR InterPro; IPR015172; MIF4G-like_typ-1.
DR InterPro; IPR015174; MIF4G-like_typ-2.
DR InterPro; IPR003890; MIF4G-like_typ-3.
DR PANTHER; PTHR12412; CAP BINDING PROTEIN; 1.
DR PANTHER; PTHR12412:SF2; NUCLEAR CAP-BINDING PROTEIN SUBUNIT 1; 1.
DR Pfam; PF02854; MIF4G; 1.
DR Pfam; PF09088; MIF4G_like; 1.
DR Pfam; PF09090; MIF4G_like_2; 1.
DR SMART; SM00543; MIF4G; 1.
DR SUPFAM; SSF48371; ARM repeat; 3.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000000226}.
FT DOMAIN 8..229
FT /note="MIF4G"
FT /evidence="ECO:0000259|SMART:SM00543"
FT REGION 774..799
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 644..729
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 781..796
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 862 AA; 98014 MW; 928A8CDDF8ACD452 CRC64;
MSSWKNLLLR IGDKSPEYGV SSDYKDHIDT CFGALRRELD HSQTDVLEFI LMCAERLSHK
IPLYGTLIGL INLENEDFGK QLVEKSQTIF QDALDTGNCN AVRVLMRLLT VMMCSKVLQP
SSLVAVFETF LSSAATTVDE EKGNPLWQSC ADFYITCILS CLPWGGAELF EQVPEDIERV
IVGVEAYLSI RKHTSDSGLS FFENDDENGE GLNDKDFLED LWDRIQVLAS NGWKVESVPR
PHLSFEAQLV AGKSHEFGPI SCPSLPKPPS VSSGVSTGKQ KHEAELKYPQ RIHRLNIFPP
SKHEDLQPID RFVMEEYLLD VLLFFNGCRK ECASFMVGLP VSFRYEYLMA ETIFSQLLML
PQPPFRPVYY TLIIIDLCKA LPGAFPAVVA GAVRTLFERI ADLDMECRTR LILWFSHHLS
NFQFIWPWEE WAYVLDLPKW APQRVFVQEV LEREVRLSYW DKVKQSIENA PRLEELLPPK
SGPNFSFGAE DGKESNEHEL SGKLNNMVKG KSPVREIISW IDESVFPNNG LEVTLRVIVQ
TLLNIGSKSF THLITVLERY GQVFAKVCPD EDRQVMLIAE VSSFWKSNTQ MTAIAIDRMM
GYRLVSNLAI VRWVFSAENI EQFHTSDRPW EILRNAVSKT HNRISDLRKE ILTIRKNISS
AEEAAKEAKA ELDAAESKLT LVDGEPVLGD NPVRLNRLKS HAEKTKEEVV TLQESLESKE
ALLVRAIEEN EALFLLLYKS FSNVLTERLP EGTRTLHELK SAQVDVMAVD TEEPPSMELD
DENQRSQNSQ SNGEKKGGAY TVGEKEQWCI TTLGYVKAFS RQYAAEIWPH VEKLDAEVLT
EETPFLFRSA VYTGLRRPIH EA
//
