ID W2M887_PHYPR Unreviewed; 911 AA.
AC W2M887;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE RecName: Full=RING-type domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=L914_20029 {ECO:0000313|EMBL:ETM32591.1}, L916_20134
GN {ECO:0000313|EMBL:ETL26132.1};
OS Phytophthora parasitica (Potato buckeye rot agent).
OC Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae;
OC Phytophthora.
OX NCBI_TaxID=4792 {ECO:0000313|EMBL:ETM32591.1};
RN [1] {ECO:0000313|EMBL:ETL26132.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CJ05E6 {ECO:0000313|EMBL:ETL26132.1};
RG The Broad Institute Genomics Platform;
RA Russ C., Tyler B., Panabieres F., Shan W., Tripathy S., Grunwald N.,
RA Machado M., Johnson C.S., Arredondo F., Hong C., Coffey M., Young S.K.,
RA Zeng Q., Gargeya S., Fitzgerald M., Abouelleil A., Alvarado L.,
RA Chapman S.B., Gainer-Dewar J., Goldberg J., Griggs A., Gujja S., Hansen M.,
RA Howarth C., Imamovic A., Ireland A., Larimer J., McCowan C., Murphy C.,
RA Pearson M., Poon T.W., Priest M., Roberts A., Saif S., Shea T., Sykes S.,
RA Wortman J., Nusbaum C., Birren B.;
RT "The Genome Sequence of Phytophthora parasitica CJ05E6.";
RL Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ETM32591.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IAC_01/95 {ECO:0000313|EMBL:ETM32591.1};
RG The Broad Institute Genomics Platform;
RA Russ C., Tyler B., Panabieres F., Shan W., Tripathy S., Grunwald N.,
RA Machado M., Johnson C.S., Arredondo F., Hong C., Coffey M., Young S.K.,
RA Zeng Q., Gargeya S., Fitzgerald M., Abouelleil A., Alvarado L.,
RA Chapman S.B., Gainer-Dewar J., Goldberg J., Griggs A., Gujja S., Hansen M.,
RA Howarth C., Imamovic A., Ireland A., Larimer J., McCowan C., Murphy C.,
RA Pearson M., Poon T.W., Priest M., Roberts A., Saif S., Shea T., Sykes S.,
RA Wortman J., Nusbaum C., Birren B.;
RT "The Genome Sequence of Phytophthora parasitica IAC_01/95.";
RL Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; KI676328; ETL26132.1; -; Genomic_DNA.
DR EMBL; KI676328; ETL26133.1; -; Genomic_DNA.
DR EMBL; KI696290; ETM32590.1; -; Genomic_DNA.
DR EMBL; KI696290; ETM32591.1; -; Genomic_DNA.
DR EnsemblProtists; ETL26132; ETL26132; L916_20134.
DR EnsemblProtists; ETL26133; ETL26133; L916_20134.
DR EnsemblProtists; ETM32590; ETM32590; L914_20029.
DR EnsemblProtists; ETM32591; ETM32591; L914_20029.
DR VEuPathDB; FungiDB:PPTG_18212; -.
DR Proteomes; UP000053864; Unassembled WGS sequence.
DR Proteomes; UP000054532; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd16649; mRING-HC-C3HC5_CGRF1-like; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR22696; E3 UBIQUITIN-PROTEIN LIGASE RNF26; 1.
DR PANTHER; PTHR22696:SF1; E3 UBIQUITIN-PROTEIN LIGASE RNF26; 1.
DR Pfam; PF13920; zf-C3HC4_3; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT DOMAIN 375..450
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 863..900
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT REGION 1..126
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 184..232
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 583..602
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 684..711
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 743..770
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 25..41
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 188..207
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 208..223
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 584..598
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 911 AA; 102081 MW; 31BAA6B2379181C0 CRC64;
MRSPSNTSES RSPPRVDGVA ASINQQEEHD VQSSASVQPS QDKAESDEEH DTQVHIPVPT
RPAPHEPGSE PRTKRMWRAG SRQQLLERTR NRIRRSSLQQ PLDTGGGAAE VATAPSARSV
SPQGDFAEEI ESEAAEIRTL IARTAELWSA VDRAEHAEDL PPMPQLRSFS ASALHPSLPA
QYECVEEDDS TLSSDNEEDE DENTETESVT DMTLSSEANE PLRHPNSVES DDRDVVEGLQ
LEQGEIMDPS NRAINAAKAR AIKNAMLGNL LRLGFRENIT RAALEAGVLE IDHYDSDCEL
AYVDIFMSLV KMVTDAHVDV VNGENLEQNW AESEAVDANA AYNLEQRSFL PFKWPVFDMA
QFEFGNARAG TCFNSVCVLT NLPKVSMDRT EELMEILSCN LFCMIGDPIQ VVIPSASSSG
RTKGHAFLEF DDPDMAKRCA MAIDGLTWGR GPFGRIRGNL FRQYQVKSPA EEQRQTQDYV
NDDGASFSQS FAVSGSLPAQ NPPRNRIAER FRPREDVAEQ HNLLSDSDED SDAEWVVSRP
LEYSQFNPSP LDLSAGSVDM REQFEPVQHD GITMHLGWEN EALDDGYSSE DDDNDASFDS
SSALELQAPD EEKLMDQSIF DELVQDSSYN DSRCSAASGE AQASTATSTA SAAALEALAE
SGMAEQHWDV QEGDDAEKPW RRYCEDLIVR NREMQEQVAF ARRRILQLSH NNQKLHLLID
RVERDRDGLL FENDLLQTQL HGYENHAQHH DSLMQELATL RKRLKQKEHT FDLRNLDPHQ
QVQAAYAVAS RSQASHSFRS VQSALALASA TTLTHCSMEE LKEWEHLLET TLSHVRSAKE
EKALEMQKKL DRQVEEQNEL KLCVICLSNE KTILCLPCRH LCLCEACSRR EEVTKCPICR
LEIEEMLAVY S
//
