ID W2PF46_PHYPN Unreviewed; 983 AA.
AC W2PF46;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 24-JAN-2024, entry version 37.
DE RecName: Full=Small-subunit processome Utp21 domain-containing protein {ECO:0000259|Pfam:PF04192};
GN ORFNames=PPTG_18735 {ECO:0000313|EMBL:ETM99481.1};
OS Phytophthora parasitica (strain INRA-310).
OC Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae;
OC Phytophthora.
OX NCBI_TaxID=761204 {ECO:0000313|EMBL:ETM99481.1, ECO:0000313|Proteomes:UP000018817};
RN [1] {ECO:0000313|Proteomes:UP000018817}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=INRA-310 {ECO:0000313|Proteomes:UP000018817};
RG The Broad Institute Genome Sequencing Platform;
RA Russ C., Tyler B., Panabieres F., Shan W., Tripathy S., Grunwald N.,
RA Machado M., Young S.K., Zeng Q., Gargeya S., Fitzgerald M., Haas B.,
RA Abouelleil A., Alvarado L., Arachchi H.M., Berlin A., Chapman S.B.,
RA Gearin G., Goldberg J., Griggs A., Gujja S., Hansen M., Heiman D.,
RA Howarth C., Larimer J., Lui A., MacDonald P.J.P., McCowen C.,
RA Montmayeur A., Murphy C., Neiman D., Pearson M., Priest M., Roberts A.,
RA Saif S., Shea T., Sisk P., Stolte C., Sykes S., Wortman J., Nusbaum C.,
RA Birren B.;
RL Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ETM99481.1, ECO:0000313|Proteomes:UP000018817}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=INRA-310 {ECO:0000313|EMBL:ETM99481.1,
RC ECO:0000313|Proteomes:UP000018817};
RG The Broad Institute Genomics Platform;
RA Russ C., Tyler B., Panabieres F., Shan W., Tripathy S., Grunwald N.,
RA Machado M., Johnson C.S., Arredondo F., Hong C., Coffey M., Young S.K.,
RA Zeng Q., Gargeya S., Fitzgerald M., Abouelleil A., Alvarado L.,
RA Chapman S.B., Gainer-Dewar J., Goldberg J., Griggs A., Gujja S., Hansen M.,
RA Howarth C., Imamovic A., Ireland A., Larimer J., McCowan C., Murphy C.,
RA Pearson M., Poon T.W., Priest M., Roberts A., Saif S., Shea T., Sykes S.,
RA Wortman J., Nusbaum C., Birren B.;
RT "The Genome Sequence of Phytophthora parasitica INRA-310.";
RL Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; KI669652; ETM99481.1; -; Genomic_DNA.
DR RefSeq; XP_008915219.1; XM_008916971.1.
DR AlphaFoldDB; W2PF46; -.
DR EnsemblProtists; ETM99481; ETM99481; PPTG_18735.
DR GeneID; 20187576; -.
DR VEuPathDB; FungiDB:PPTG_18735; -.
DR OrthoDB; 5477616at2759; -.
DR Proteomes; UP000018817; Unassembled WGS sequence.
DR GO; GO:0032040; C:small-subunit processome; IEA:InterPro.
DR GO; GO:0006364; P:rRNA processing; IEA:InterPro.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR011047; Quinoprotein_ADH-like_supfam.
DR InterPro; IPR007319; SSU_processome_Utp21.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR22840; WD REPEAT-CONTAINING PROTEIN 36; 1.
DR PANTHER; PTHR22840:SF12; WD REPEAT-CONTAINING PROTEIN 36; 1.
DR Pfam; PF04192; Utp21; 1.
DR Pfam; PF00400; WD40; 3.
DR SMART; SM00320; WD40; 11.
DR SUPFAM; SSF50998; Quinoprotein alcohol dehydrogenase-like; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 3.
DR PROSITE; PS50294; WD_REPEATS_REGION; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000018817};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT REPEAT 243..274
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 503..544
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 586..627
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT DOMAIN 729..979
FT /note="Small-subunit processome Utp21"
FT /evidence="ECO:0000259|Pfam:PF04192"
FT REGION 792..833
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 792..808
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 812..827
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 983 AA; 109483 MW; 5E1F218C72B18786 CRC64;
MGKASFATAS LGKSFVVYNC DKLTPVLVSP QLPKRIAALA VQPKKHLTFT ACGRQIIVWK
RVQRVKTLLG HKGTIKQMMA VGNVLFALDD ERDIKIWDLD TMELVDTLSF PVGFTPTVML
HPDTYLNKVL VGSERGALQL WNIRKMKCIY EFKGWGSAVT ALEQSPAVDV VSIGLADGRL
MVHHLQLDER VLDFKQDQQS GITSMSFRTD TGASTTPLVV SGSRSGDIAV WNLQTKRLES
VIAGAHDGAV VSLQFLANEP LLLSSGTDNS IKMWIFDHLN GGTARLLKSR EGHRAPPTRI
RYYGNNTLAT MADGADGTCC QILSAGQDRA FRVFHTAREQ QSRELSQGPV LKKARSLNVR
VEDLKLPPIV QFASMETRAR DWANVITCHE NEIAAYVWRF EHRAIGKKVL RQFDPTNRVP
SGSAEDLRRK KTQAISVAIS SCGNYAFVGS LGGSIFRYNM QSGEKRGSYP VAATPKEKII
RSLVLPGTDL SALQDDEADK TAADVHNGPV SAVAVDALNE TLVSAGIDGK LKFWGFKKHE
LRYEIDVGSP ISQMELHRDS NLLCVACDDQ VLRLYDVTTH KLVRRFAGHS HRVTDMTFSS
DARWLFSSSA DASLRVWDIP TGKCVDWMRF QKPVTGLAVS PTGEFLATTH VSHVGIFLWA
NRSFFTEVFL DSEPTEPILM DMPVSLNEVD NSDQLGFGTE RNPQLSVSSV VEQRPGSVKV
EGEESSEPLD TSLITLSTAP RAFWQSLFNL ELIKKRNKPI EPPKAPEQAP FFLQTARKDD
VHPTFVPVAP EAKKETEKDE KDLAMDGWGV GDDDEAWGDD DGEEPEDEVA TPSSRIVKTE
GMVTTRCKLA TLLAKAVQEE EDEDHTVSRF NEVAKYMQSL SASAVDVEMS TLCMGDFDEE
GKKLLSWFLD FLREEMQTRR DFQVLQAYLN RFLKLHEELL VADPALLAQV DELGAVQQQQ
WQHLQKLLHN NLCLVQYLSK IQM
//
