ID W2ZGD0_PHYPR Unreviewed; 1408 AA.
AC W2ZGD0;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 03-MAY-2023, entry version 31.
DE RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
GN ORFNames=F442_07328 {ECO:0000313|EMBL:ETP46422.1};
OS Phytophthora parasitica P10297.
OC Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae;
OC Phytophthora.
OX NCBI_TaxID=1317064 {ECO:0000313|EMBL:ETP46422.1, ECO:0000313|Proteomes:UP000018948};
RN [1] {ECO:0000313|EMBL:ETP46422.1, ECO:0000313|Proteomes:UP000018948}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=P10297 {ECO:0000313|EMBL:ETP46422.1,
RC ECO:0000313|Proteomes:UP000018948};
RG The Broad Institute Genomics Platform;
RA Russ C., Tyler B., Panabieres F., Shan W., Tripathy S., Grunwald N.,
RA Machado M., Johnson C.S., Walker B., Young S.K., Zeng Q., Gargeya S.,
RA Fitzgerald M., Haas B., Abouelleil A., Allen A.W., Alvarado L.,
RA Arachchi H.M., Berlin A.M., Chapman S.B., Gainer-Dewar J., Goldberg J.,
RA Griggs A., Gujja S., Hansen M., Howarth C., Imamovic A., Ireland A.,
RA Larimer J., McCowan C., Murphy C., Pearson M., Poon T.W., Priest M.,
RA Roberts A., Saif S., Shea T., Sisk P., Sykes S., Wortman J., Nusbaum C.,
RA Birren B.;
RT "The Genome Sequence of Phytophthora parasitica P10297.";
RL Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ETP46422.1}.
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DR EMBL; ANIY01001519; ETP46422.1; -; Genomic_DNA.
DR EMBL; ANIY01001519; ETP46423.1; -; Genomic_DNA.
DR EnsemblProtists; ETP46422; ETP46422; F442_07328.
DR EnsemblProtists; ETP46423; ETP46423; F442_07328.
DR Proteomes; UP000018948; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0045892; P:negative regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00590; RRM_SF; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR039778; PDCD4.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR12626; PROGRAMMED CELL DEATH 4; 1.
DR PANTHER; PTHR12626:SF0; PROGRAMMED CELL DEATH PROTEIN 4; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000018948};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT DOMAIN 1263..1348
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 167..235
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 257..828
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 856..926
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 941..1225
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 167..181
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 195..215
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 270..296
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 297..329
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 340..364
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 365..408
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 435..483
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 530..544
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 553..572
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 603..621
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 622..649
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 658..679
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 693..710
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 744..762
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 763..782
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 896..921
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 942..968
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 981..1002
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1003..1025
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1038..1059
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1060..1104
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1136..1182
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1190..1205
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1408 AA; 154515 MW; E5E01CEBDD6DFAAC CRC64;
MGDSVAALWD SELLRARQWL AATRRAKHRG NDRLFQRVKA HIGYKDHQLS LQTETTASED
EDDGALDFLG DVDVSDMSAL LQAEAAKAAA AATPVEPALS AGDLMKPLEM PNNLVSPNLK
PKTKAVPMSQ LDPKALGTST TSTMTASATL GDDSSVNELL QELNVQVHHS DSEETKTEES
TPPHLLKSFG DDKTGGNGMQ VQTGRAQYMH QVSSKSPQDP HKKKAAAPVT ATTKPDDVTA
EMLSWVTGYR DPEVIRRKEN MRRKRKHTHR YGMTSEEEQH QVLLQVKRII RESDSDSEDD
MSSDYSPAED EEIPEPDEPD VVDLLSDDYL DSDEDKRPAK RKRKRLRQAE TSTKKKKTHS
RKPAVTRKVT QGATSSTTSS PVNVQEARPL SSSAGNGTGL TPATTTEESD DGKPNHPIEL
LSSGDETGDS DKGSTPQVHA DHSKSNHSAD SNAKDSEVSK ESTILRLKIP QDRLLEEHNQ
EQEPNPAEAT NAFSTAPGAV DKISADSVIP SGVVSPETAA AERTQESGTH DDSTNITNTA
MHPSGASDDD ADLSDTGTVD FEGEDLSVET EENIDQDNSI AAELVVDSGT DKEQQGPDVN
AGEKQGKAEH ASGKAQSSAE LEDDDVSEAE TEILDDDEPD TDDLGLDYSD DSDSGDKSPS
NAKNTARGEV DTATSSKMDD GTTSKEKSTS ERSGDCSPNG KTTSGDKIDA SRAGVQQFFD
FTPLKLKPKT KTTTSTAPKP LPVHTYDETH RKKGESASGK AADDQKKSSV TPTKSTVGSN
GLRPKTLKKP VATTTTMKGK YAVTRRSTKM LNPEDTPGAK RPSKSQYTMV PTKAFNNNVA
KDLDDVPLAI LAKEMAKKPD DKPQARYLSY AGAKKTEDAP TYAAQTPRIV SKSRYGGGGL
NSSLLTTQDS SVASNGQYSQ VKDKGGYRRE PQISIYDALH MDEQESASDI REGAGYKRPS
RFKKMQEEAA RNGTPMVKSR LQDTDWDKVP IPKKKKQASQ VEKSTLDAKT SKTVSVGNVA
KQGGNAQNKR RKKNSASSKK NTGPSYYGPQ AAQSAKSDKY DSPSRGRRGR EHSNRRDDDR
RRERSPSPHS RDRDRHDRRD DRRRRGSSRS RSRSLSPRGM NYGSSRHRRR SRSRSWSRER
SSERDHRRTD SRDWNRQTNG SRRSRSPDFR DSSKKKESTE PLEVGEVCQN GKIEDSDRPA
KKQKTPHSSE TSPLPGALAP FDDDGDNMFI SDSDDDGNAL IKEVEDIRFN LDSVSVDEGL
MARQVYVTGV NATVFAEQIE EDFARFGVAV DRETGFPAID IFSCQRTRFG RGDACVTFET
ERGALEAVEE LNSKNVKNSM IRVQRMDAHT QRILTVQFQT ARDTWKCTGT KCRADVSIWN
AKCDKCGRPR VYGPSNIKIG AESWLCSL
//
