ID W5IV42_PSEUO Unreviewed; 420 AA.
AC W5IV42;
DT 19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT 19-MAR-2014, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE SubName: Full=Protocatechuate 4,5-dioxygenase subunit alpha {ECO:0000313|EMBL:ETM66112.1};
DE EC=1.13.11.8 {ECO:0000313|EMBL:ETM66112.1};
GN ORFNames=PM1_0207915 {ECO:0000313|EMBL:ETM66112.1};
OS Pseudomonas sp. (strain M1).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=95619 {ECO:0000313|EMBL:ETM66112.1};
RN [1] {ECO:0000313|EMBL:ETM66112.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=M1 {ECO:0000313|EMBL:ETM66112.1};
RX PubMed=10388678;
RA Iurescia S., Marconi A.M., Tofani D., Gambacorta A., Paterno A.,
RA Devirgiliis C., van der Werf M.J., Zennaro E.;
RT "Identification and sequencing of beta-myrcene catabolism genes from
RT Pseudomonas sp. strain M1.";
RL Appl. Environ. Microbiol. 65:2871-2876(1999).
RN [2] {ECO:0000313|EMBL:ETM66112.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=M1 {ECO:0000313|EMBL:ETM66112.1};
RA Soares-Castro P.M., Santos P.M.;
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:ETM66112.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=M1 {ECO:0000313|EMBL:ETM66112.1};
RX PubMed=23405299;
RA Soares-Castro P., Santos P.M.;
RT "Towards the Description of the Genome Catalogue of Pseudomonas sp. Strain
RT M1.";
RL Genome Announc. 1:E00146-E00112(2013).
RN [4] {ECO:0000313|EMBL:ETM66112.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=M1 {ECO:0000313|EMBL:ETM66112.1};
RA Soares-Castro P., Santos P.M.;
RT "Decyphering the genome repertoire of Pseudomonas sp. M1 towards myrcene
RT biotransformation.";
RL Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ETM66112.1}.
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DR EMBL; ANIR02000002; ETM66112.1; -; Genomic_DNA.
DR RefSeq; WP_009618367.1; NZ_CP094343.1.
DR AlphaFoldDB; W5IV42; -.
DR eggNOG; COG3384; Bacteria.
DR GO; GO:0008198; F:ferrous iron binding; IEA:InterPro.
DR GO; GO:0018579; F:protocatechuate 4,5-dioxygenase activity; IEA:UniProtKB-EC.
DR GO; GO:0006725; P:cellular aromatic compound metabolic process; IEA:InterPro.
DR CDD; cd07950; Gallate_Doxase_N; 1.
DR Gene3D; 1.10.700.10; Dioxygenase LigAB, LigA subunit; 1.
DR Gene3D; 3.40.830.10; LigB-like; 1.
DR InterPro; IPR034939; Gallate_Doxase_N.
DR InterPro; IPR036622; LigA_sf.
DR InterPro; IPR011986; Xdiol_dOase_LigA.
DR InterPro; IPR004183; Xdiol_dOase_suB.
DR Pfam; PF07746; LigA; 1.
DR Pfam; PF02900; LigB; 1.
DR SUPFAM; SSF48076; LigA subunit of an aromatic-ring-opening dioxygenase LigAB; 1.
DR SUPFAM; SSF53213; LigB-like; 1.
PE 4: Predicted;
KW Oxidoreductase {ECO:0000313|EMBL:ETM66112.1}.
FT DOMAIN 8..269
FT /note="Extradiol ring-cleavage dioxygenase class III enzyme
FT subunit B"
FT /evidence="ECO:0000259|Pfam:PF02900"
FT DOMAIN 321..407
FT /note="Extradiol ring-cleavage dioxygenase LigAB LigA
FT subunit"
FT /evidence="ECO:0000259|Pfam:PF07746"
SQ SEQUENCE 420 AA; 47609 MW; 506E3E1BCC11CFD3 CRC64;
MARIIGGLAV SHTPTIGFAV DHDKQEEAAW APIFKSFEPI RAWLQEQRPD VLFYIFNDHV
TSFFFDHYSA FTLGVDDRYG VADEGGNPRE LPPVGGHAAL SRHIGQSLMA DEFDMSFFRD
RPLDHGFFSP MSALLPCADG WPLQIVPLQV GVLQLPIPSA RRCYKLGQAL RRAIESYPED
LKVAIVATGG VSHQVHGERC GFNNPEWDAQ FIELLVNDPE RLTEMTVAEY ATLGGMEGAE
VITWLIMRGA LSASVDKLHQ DYYLPSMTGI ATLLLQNRDQ RLPAPAIERH RQHMQHQLAG
AEKLEGTYPY TLERSAKGYR LNKFLHRMIE PQWRQRFLAE PEALYEEAGL SEEERDLLRR
RDWRGLIHYG VIFFVLEKLG AVLGVSNLDI YAAMRGQSLE DFMKTRNQQV RYSVAGKAPR
//
