GenomeNet

Database: UniProt
Entry: W5JCV5_ANODA
LinkDB: W5JCV5_ANODA
Original site: W5JCV5_ANODA 
ID   W5JCV5_ANODA            Unreviewed;       345 AA.
AC   W5JCV5;
DT   19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT   19-MAR-2014, sequence version 1.
DT   24-JAN-2024, entry version 38.
DE   RecName: Full=CSD domain-containing protein {ECO:0000259|PROSITE:PS51857};
GN   ORFNames=AND_007661 {ECO:0000313|EMBL:ETN60720.1};
OS   Anopheles darlingi (Mosquito).
OC   Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC   Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae;
OC   Anophelinae; Anopheles.
OX   NCBI_TaxID=43151 {ECO:0000313|EMBL:ETN60720.1};
RN   [1] {ECO:0000313|EMBL:ETN60720.1, ECO:0000313|Proteomes:UP000000673}
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=20920257; DOI=10.1186/1471-2164-11-529;
RA   Mendes N.D., Freitas A.T., Vasconcelos A.T., Sagot M.F.;
RT   "Combination of measures distinguishes pre-miRNAs from other stem-loops in
RT   the genome of the newly sequenced Anopheles darlingi.";
RL   BMC Genomics 11:529-529(2010).
RN   [2] {ECO:0000313|EMBL:ETN60720.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Almeida L.G., Nicolas M.F., Souza R.C., Vasconcelos A.T.R.;
RL   Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EMBL:ETN60720.1}
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=23761445;
RA   Marinotti O., Cerqueira G.C., de Almeida L.G., Ferro M.I., Loreto E.L.,
RA   Zaha A., Teixeira S.M., Wespiser A.R., Almeida E Silva A.,
RA   Schlindwein A.D., Pacheco A.C., Silva A.L., Graveley B.R., Walenz B.P.,
RA   Lima Bde A., Ribeiro C.A., Nunes-Silva C.G., de Carvalho C.R., Soares C.M.,
RA   de Menezes C.B., Matiolli C., Caffrey D., Araujo D.A., de Oliveira D.M.,
RA   Golenbock D., Grisard E.C., Fantinatti-Garboggini F., de Carvalho F.M.,
RA   Barcellos F.G., Prosdocimi F., May G., Azevedo Junior G.M., Guimaraes G.M.,
RA   Goldman G.H., Padilha I.Q., Batista Jda S., Ferro J.A., Ribeiro J.M.,
RA   Fietto J.L., Dabbas K.M., Cerdeira L., Agnez-Lima L.F., Brocchi M.,
RA   de Carvalho M.O., Teixeira Mde M., Diniz Maia Mde M., Goldman M.H.,
RA   Cruz Schneider M.P., Felipe M.S., Hungria M., Nicolas M.F., Pereira M.,
RA   Montes M.A., Cantao M.E., Vincentz M., Rafael M.S., Silverman N.,
RA   Stoco P.H., Souza R.C., Vicentini R., Gazzinelli R.T., Neves Rde O.,
RA   Silva R., Astolfi-Filho S., Maciel T.E., Urmenyi T.P., Tadei W.P.,
RA   Camargo E.P., de Vasconcelos A.T.;
RT   "The genome of Anopheles darlingi, the main neotropical malaria vector.";
RL   Nucleic Acids Res. 41:7387-7400(2013).
RN   [4] {ECO:0000313|EnsemblMetazoa:ADAC007661-PA}
RP   IDENTIFICATION.
RG   EnsemblMetazoa;
RL   Submitted (JUN-2015) to UniProtKB.
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DR   EMBL; ADMH02001871; ETN60720.1; -; Genomic_DNA.
DR   AlphaFoldDB; W5JCV5; -.
DR   STRING; 43151.W5JCV5; -.
DR   EnsemblMetazoa; ADAC007661-RA; ADAC007661-PA; ADAC007661.
DR   VEuPathDB; VectorBase:ADAC007661; -.
DR   VEuPathDB; VectorBase:ADAR2_002020; -.
DR   eggNOG; KOG3070; Eukaryota.
DR   HOGENOM; CLU_804665_0_0_1; -.
DR   OrthoDB; 218650at2759; -.
DR   Proteomes; UP000000673; Unassembled WGS sequence.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   CDD; cd04458; CSP_CDS; 1.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR   InterPro; IPR011129; CSD.
DR   InterPro; IPR019844; CSD_1.
DR   InterPro; IPR002059; CSP_DNA-bd.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   PANTHER; PTHR12962; CALCIUM-REGULATED HEAT STABLE PROTEIN CRHSP-24-RELATED; 1.
DR   PANTHER; PTHR12962:SF1; COLD SHOCK DOMAIN-CONTAINING PROTEIN CG9705; 1.
DR   Pfam; PF00313; CSD; 1.
DR   SMART; SM00357; CSP; 1.
DR   SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR   PROSITE; PS00352; CSD_1; 1.
DR   PROSITE; PS51857; CSD_2; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000000673}.
FT   DOMAIN          255..321
FT                   /note="CSD"
FT                   /evidence="ECO:0000259|PROSITE:PS51857"
FT   REGION          1..67
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   345 AA;  37709 MW;  B435718D701E219C CRC64;
     MSSGIQITAD DKPATGVGAT PTKTPPVVGP PPVSSIPSSP SHLQLPSPII TRPYNDNGDD
     DKSDDDNALC RLQMNRALLF LSSSSSSYEA QLDKVVKGLI ASFITIEPSN IKARILAAML
     SMLSTQKEGG GPIGLDLETA HNRCMSTFDG VEYASDDRLC CIDWQPTPSL THPYNGKISL
     TSKTVLAQNV CIGKPQTPMQ NGERTLTMTL MPTRSPLNAG CRRSRDPISI DHRLYPRPPV
     RPHSWTSDRA MRNPIEEGKV KSFSRSKGHG FIVPSAGGDD IFVHISDIEG EYVPLPGDEV
     SYRLCSIPPK YEKVQAIHVQ ITHLTPEKHS RWETCIGPDD GHRLH
//
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