ID W5L9L8_ASTMX Unreviewed; 626 AA.
AC W5L9L8;
DT 16-APR-2014, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 2.
DT 27-MAR-2024, entry version 46.
DE SubName: Full=Serine/arginine repetitive matrix 3 {ECO:0000313|Ensembl:ENSAMXP00000016530.2};
GN Name=SRRM3 {ECO:0000313|Ensembl:ENSAMXP00000016530.2};
OS Astyanax mexicanus (Blind cave fish) (Astyanax fasciatus mexicanus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes;
OC Characoidei; Characidae; Astyanax.
OX NCBI_TaxID=7994 {ECO:0000313|Ensembl:ENSAMXP00000016530.2, ECO:0000313|Proteomes:UP000018467};
RN [1] {ECO:0000313|Proteomes:UP000018467}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=female {ECO:0000313|Proteomes:UP000018467};
RA Jeffery W., Warren W., Wilson R.K.;
RL Submitted (MAR-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000018467}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=female {ECO:0000313|Proteomes:UP000018467};
RX PubMed=25329095; DOI=10.1038/ncomms6307;
RA McGaugh S.E., Gross J.B., Aken B., Blin M., Borowsky R., Chalopin D.,
RA Hinaux H., Jeffery W.R., Keene A., Ma L., Minx P., Murphy D., O'Quin K.E.,
RA Retaux S., Rohner N., Searle S.M., Stahl B.A., Tabin C., Volff J.N.,
RA Yoshizawa M., Warren W.C.;
RT "The cavefish genome reveals candidate genes for eye loss.";
RL Nat. Commun. 5:5307-5307(2014).
RN [3] {ECO:0000313|Ensembl:ENSAMXP00000016530.2}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR AlphaFoldDB; W5L9L8; -.
DR STRING; 7994.ENSAMXP00000016530; -.
DR Ensembl; ENSAMXT00000016530.2; ENSAMXP00000016530.2; ENSAMXG00000016051.2.
DR eggNOG; KOG1869; Eukaryota.
DR GeneTree; ENSGT00940000162625; -.
DR HOGENOM; CLU_027803_0_0_1; -.
DR InParanoid; W5L9L8; -.
DR OrthoDB; 5324266at2759; -.
DR Proteomes; UP000018467; Unassembled WGS sequence.
DR Bgee; ENSAMXG00000016051; Expressed in brain and 5 other cell types or tissues.
DR GO; GO:0005634; C:nucleus; IEA:UniProt.
DR CDD; cd21376; cwf21_SRRM3; 1.
DR Gene3D; 6.10.140.420; -; 1.
DR InterPro; IPR013170; mRNA_splic_Cwf21_dom.
DR InterPro; IPR047489; SRRM3_cwf21.
DR InterPro; IPR029360; SRRM_C.
DR PANTHER; PTHR34755; SERINE/ARGININE REPETITIVE MATRIX PROTEIN 3-RELATED; 1.
DR PANTHER; PTHR34755:SF2; SERINE_ARGININE REPETITIVE MATRIX PROTEIN 3; 1.
DR Pfam; PF08312; cwf21; 1.
DR Pfam; PF15230; SRRM_C; 1.
DR SMART; SM01115; cwf21; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000018467}.
FT DOMAIN 53..98
FT /note="CWF21"
FT /evidence="ECO:0000259|SMART:SM01115"
FT REGION 1..46
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 98..130
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 148..626
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 26..46
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 162..178
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 189..228
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 242..267
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 268..282
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 283..305
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 307..328
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 329..350
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 365..396
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 397..411
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 415..462
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 463..480
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 481..517
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 524..542
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 551..582
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 583..601
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 602..626
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 626 AA; 70447 MW; 14E5EC28780FE153 CRC64;
MYDGARVPSP GEGANGVPLQ PAARPTAEEE PEKEEAVQQP EPVLVKKAHR EILDHERKRR
VELKCMELQE MMEEQGYSEE EIRQKVGTFR QMLMEKEGVI TREGSHPRPP VTVLPHGDGE
DAEGHPFTAG YEEGYKWHSD YYDQDALAKD EYRDKRKSSS SLSPPPKKRK KKKGRRHSRV
DSSSPTRRGK RKKSSKKHKR DRSASGSRRK RRHRSGSPKN KHKDKSKLRK KSPVESASRR
PQHRGSCCSS RSASASSIAS ISKSPSRSNQ KHKTDEHKPC GRSSHSPSPS LGQEHATYRQ
NGHHSSSRVR NGKDSGPNHL EGERVNDRLR SVASSSPSEA QRQTSPNVRE VKSHGGGPPV
AEAGKGEERQ QRGAKHPSEP SGRRGGRPRA QEKSGHSPAH SSDSQLDLQP KAKSAHQKKA
KGSHSSKKHH RGRGPNRHRS TSASPGRHRH ASGRKKSKTQ GSVRQRSRSW SSGRSSSRSN
SREHAASKTK SPHPRQNNSR ERDSPHYSDA ERARRRSRSY SPIRKRRRDS PSFMEARRIT
SARKRPIPYY RPSPSSSSSA SSYSSSSRSR SYDSYSSYSR SRSRSRSRSR SRSKSSRSRS
RSRSFTRSPS QAHSYYSHSS YESPGF
//
