ID W6U2E0_9SPHI Unreviewed; 260 AA.
AC W6U2E0;
DT 16-APR-2014, integrated into UniProtKB/TrEMBL.
DT 16-APR-2014, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE RecName: Full=HTH cro/C1-type domain-containing protein {ECO:0000259|PROSITE:PS50943};
GN ORFNames=N824_20195 {ECO:0000313|EMBL:ETZ23779.1};
OS Pedobacter sp. V48.
OC Bacteria; Bacteroidota; Sphingobacteriia; Sphingobacteriales;
OC Sphingobacteriaceae; Pedobacter.
OX NCBI_TaxID=509635 {ECO:0000313|EMBL:ETZ23779.1, ECO:0000313|Proteomes:UP000019145};
RN [1] {ECO:0000313|EMBL:ETZ23779.1, ECO:0000313|Proteomes:UP000019145}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=V48 {ECO:0000313|EMBL:ETZ23779.1,
RC ECO:0000313|Proteomes:UP000019145};
RX PubMed=24578271;
RA Bitzer A.S., Garbeva P., Silby M.W.;
RT "Draft Genome Sequence of Pedobacter sp. Strain V48, Isolated from a
RT Coastal Sand Dune in the Netherlands.";
RL Genome Announc. 2:e00094-e00014(2014).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ETZ23779.1}.
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DR EMBL; AWRU01000006; ETZ23779.1; -; Genomic_DNA.
DR STRING; 509635.N824_20195; -.
DR eggNOG; COG1357; Bacteria.
DR eggNOG; COG1396; Bacteria.
DR Proteomes; UP000019145; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 2.160.20.80; E3 ubiquitin-protein ligase SopA; 2.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001646; 5peptide_repeat.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR PANTHER; PTHR14136:SF17; BTB_POZ DOMAIN-CONTAINING PROTEIN KCTD9; 1.
DR PANTHER; PTHR14136; UNCHARACTERIZED; 1.
DR Pfam; PF01381; HTH_3; 1.
DR Pfam; PF13599; Pentapeptide_4; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF141571; Pentapeptide repeat-like; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 4: Predicted;
FT DOMAIN 11..65
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 260 AA; 28810 MW; 3A51DAA2CADAE103 CRC64;
MLSTKMIGNK IAEARKKINT SQVQLAQLLF ISPQAVGKWE RGESMPDITT FNRLAEILGV
DLNYFSESFQ SEATGIPPIE LPSGKQERKL SWDMSLGNWI DADFSGLKNL HEKFSSSNMQ
RCKFIGSDLS GLLLKSNNLD SCDFSDSDIS NSHIRASNLD NNLFKNSSLK EAKFLKSYIR
YCDFSGSDIS SSQIQSSHLS NNLFKGCSLK EADFLKSHLE GCDFSGADFT GVRXKSXXXX
XXXXXGXSXX XXXXXXXTXC
//
