ID W6V8M7_ECHGR Unreviewed; 1398 AA.
AC W6V8M7;
DT 16-APR-2014, integrated into UniProtKB/TrEMBL.
DT 16-APR-2014, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE RecName: Full=LIM zinc-binding domain-containing protein {ECO:0000259|PROSITE:PS50023};
GN ORFNames=EGR_02335 {ECO:0000313|EMBL:EUB62894.1};
OS Echinococcus granulosus (Hydatid tapeworm).
OC Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Platyhelminthes; Cestoda;
OC Eucestoda; Cyclophyllidea; Taeniidae; Echinococcus;
OC Echinococcus granulosus group.
OX NCBI_TaxID=6210 {ECO:0000313|EMBL:EUB62894.1, ECO:0000313|Proteomes:UP000019149};
RN [1] {ECO:0000313|EMBL:EUB62894.1, ECO:0000313|Proteomes:UP000019149}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24013640; DOI=10.1038/ng.2757;
RA Zheng H., Zhang W., Zhang L., Zhang Z., Li J., Lu G., Zhu Y., Wang Y.,
RA Huang Y., Liu J., Kang H., Chen J., Wang L., Chen A., Yu S., Gao Z.,
RA Jin L., Gu W., Wang Z., Zhao L., Shi B., Wen H., Lin R., Jones M.K.,
RA Brejova B., Vinar T., Zhao G., McManus D.P., Chen Z., Zhou Y., Wang S.;
RT "The genome of the hydatid tapeworm Echinococcus granulosus.";
RL Nat. Genet. 45:1168-1175(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EUB62894.1}.
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DR EMBL; APAU02000010; EUB62894.1; -; Genomic_DNA.
DR STRING; 6210.W6V8M7; -.
DR EnsemblMetazoa; XM_024491584.1; XP_024354090.1; GeneID_36338050.
DR OMA; KDETHYI; -.
DR OrthoDB; 5399346at2759; -.
DR Proteomes; UP000019149; Unassembled WGS sequence.
DR GO; GO:0003779; F:actin binding; IEA:UniProtKB-KW.
DR GO; GO:0071949; F:FAD binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 1.10.418.10; Calponin-like domain; 1.
DR Gene3D; 2.10.110.10; Cysteine Rich Protein; 1.
DR Gene3D; 3.50.50.60; FAD/NAD(P)-binding domain; 1.
DR InterPro; IPR036872; CH_dom_sf.
DR InterPro; IPR002938; FAD-bd.
DR InterPro; IPR036188; FAD/NAD-bd_sf.
DR InterPro; IPR001781; Znf_LIM.
DR PANTHER; PTHR23167:SF54; [F-ACTIN]-MONOOXYGENASE MICAL; 1.
DR PANTHER; PTHR23167; CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED; 1.
DR Pfam; PF01494; FAD_binding_3; 1.
DR SMART; SM00132; LIM; 1.
DR SUPFAM; SSF47576; Calponin-homology domain, CH-domain; 1.
DR SUPFAM; SSF51905; FAD/NAD(P)-binding domain; 1.
DR PROSITE; PS50023; LIM_DOMAIN_2; 1.
PE 4: Predicted;
KW Actin-binding {ECO:0000256|ARBA:ARBA00023203};
KW LIM domain {ECO:0000256|ARBA:ARBA00023038, ECO:0000256|PROSITE-
KW ProRule:PRU00125}; Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00125};
KW Monooxygenase {ECO:0000256|ARBA:ARBA00023033};
KW Oxidoreductase {ECO:0000256|ARBA:ARBA00023033};
KW Reference proteome {ECO:0000313|Proteomes:UP000019149};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00125}.
FT DOMAIN 840..902
FT /note="LIM zinc-binding"
FT /evidence="ECO:0000259|PROSITE:PS50023"
FT REGION 974..1034
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1107..1135
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1154..1197
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1377..1398
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 993..1023
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1113..1133
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1168..1182
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1398 AA; 155330 MW; 2160551B81BB93C4 CRC64;
MNAVNTVNYE PIENYFDKFC VSTTFEGIVT AFERLCDAAN LGSLPGSGQF YKELRRRLSF
YWKAEALFTI LDVRFGERIY GGQTICRNIQ VLVVGCGPCG LRCAIELALL GANVVIIDKR
TSFSRNNVLH LWPYLISDLK SLGAKSFFGK FCAGSIDHIS IRTLQCILLK VALLFGVQVV
SGVEFHKLIQ PSDDTEESDV CSGENGSKTP RCRGERPLRD LFTLYEGKRR ARYGWRVEVA
PSHEALSTFE FNAIIDATGK SSCCLNFPRR ALRCRLAIAI TMNFINYGYV EEAHVEEISG
VGSIFNQPYF AQISKTLGIE LENLVYYKDE THYIVMTIKK RSLLTKGVLI KDLEDPVKLL
SAENVNFSAL EQLAREVATF VTRGGLRRLD FALNSRGQPD VAVFDFTSLS AAQYACRVVD
RKGRPLCQCL VGDALLEPFW PRGSGCALGF LSALDAAWTV SLFAAGHHAL RVIAWRDSVY
QRLSQTSPSN MPPNFAAYSF LPTARYTCID LELVRPMQVR HLYDSDVTAN MTERKSFAFL
RDSVKFDDPD IIPTATISAA KQNDCSFKPT FSPHISLLKW YQQRLSPYPD TLCPPIIDLS
AETWADGRAL RCLLHKYRSD LVSEEALKME VAMGVGEVVR LLAEYFGAPS TLVDTTWLQY
LDVLHDCLKD HDPAFVANMT VRGQLVAKNG VQQHSFVVAS SSDSIRPFNR CIDPLASPRV
SSRTRPLLSP RVECRRVNVP MLQRSLENPM ARAEPPSTLR AREDASSAVK KGLMAKRRSD
LIAMLNDPAS ARRRSLLIDW ERAFEEGGLQ PLPSPPRCLL PPRDHQSSNG AASFREKSRD
FCAVCKKPLY AAESRAYDGF RLHPNCFRCV ECHRTLRPDI AHCLRHQTNL GVRAHTLVSC
TRAQGWRNTH HSEARVACDA GADVRAAACF ASSLILSSQT LLCSRSPSRS LCRLAKFYCT
AHFHPALTIA EATTSGSRIS TRKPVLPKPR AHNTPSLFSQ LANPASPPGL RWHSSNNSPM
TTEGVERAKP GASAELRRRS AARGIRDEPA PPILLTSRNV PGTLGLPECV RRAAFDERLY
RLNGCPSPDD FISNRTSRIL DEEEDCFASS ENELSDRGLT TSNITSTASE SPPMSLDEAK
HLCCIMREKN LYRRHHPSTG SSSGSREEEE EKEDDDDDSM SDEDSKLVNM DTFDTPQPIS
EYENVRWTLV RPPPSPVSSV ATNAIGAVSS TSAAEPSLLV RKYGLSGSML LAKQRFCMAD
PEPIHIDPRA FRATRNKERT IETTLPDCTE QVEFLPDANL TSLPLAEVGH PSVDGIDFSL
TYGLVKVIPP HSSSTQLNVA LHTDPVEPLP SLVSANLQEL SVHEVLNRSD AVVHHAFSST
SRNNHHQRHP TPHSVRGH
//