ID W7QAB4_9GAMM Unreviewed; 721 AA.
AC W7QAB4;
DT 16-APR-2014, integrated into UniProtKB/TrEMBL.
DT 16-APR-2014, sequence version 1.
DT 27-MAR-2024, entry version 39.
DE RecName: Full=diguanylate cyclase {ECO:0000256|ARBA:ARBA00012528};
DE EC=2.7.7.65 {ECO:0000256|ARBA:ARBA00012528};
GN ORFNames=Q427_30930 {ECO:0000313|EMBL:EWG98380.1};
OS Halomonas sp. BC04.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Oceanospirillales;
OC Halomonadaceae; Halomonas.
OX NCBI_TaxID=1403540 {ECO:0000313|EMBL:EWG98380.1, ECO:0000313|Proteomes:UP000019279};
RN [1] {ECO:0000313|EMBL:EWG98380.1, ECO:0000313|Proteomes:UP000019279}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BC04 {ECO:0000313|EMBL:EWG98380.1,
RC ECO:0000313|Proteomes:UP000019279};
RA Farooqui S., Greene A.C., Patel B.K.;
RT "Draft Genome Sequence of Halomonas Strain BC04, an Aromatic-degrading
RT moderate Halophilic Bacterium.";
RL Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EWG98380.1}.
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DR EMBL; AZQX01000381; EWG98380.1; -; Genomic_DNA.
DR RefSeq; WP_043518223.1; NZ_AZQX01000381.1.
DR AlphaFoldDB; W7QAB4; -.
DR PATRIC; fig|1403540.3.peg.5804; -.
DR OrthoDB; 6134624at2; -.
DR Proteomes; UP000019279; Unassembled WGS sequence.
DR GO; GO:0009881; F:photoreceptor activity; IEA:UniProtKB-KW.
DR GO; GO:0009584; P:detection of visible light; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01949; GGDEF; 1.
DR Gene3D; 3.30.450.270; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013654; PAS_2.
DR InterPro; IPR016132; Phyto_chromo_attachment.
DR InterPro; IPR013515; Phytochrome_cen-reg.
DR InterPro; IPR043150; Phytochrome_PHY_sf.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR PANTHER; PTHR45138:SF9; DIGUANYLATE CYCLASE DGCM-RELATED; 1.
DR PANTHER; PTHR45138; REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF08446; PAS_2; 1.
DR Pfam; PF00360; PHY; 1.
DR SMART; SM00267; GGDEF; 1.
DR SUPFAM; SSF55781; GAF domain-like; 2.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50046; PHYTOCHROME_2; 1.
PE 4: Predicted;
KW Chromophore {ECO:0000256|ARBA:ARBA00022991};
KW Photoreceptor protein {ECO:0000256|ARBA:ARBA00022543};
KW Receptor {ECO:0000256|ARBA:ARBA00022543};
KW Reference proteome {ECO:0000313|Proteomes:UP000019279};
KW Sensory transduction {ECO:0000256|ARBA:ARBA00022606}.
FT DOMAIN 142..300
FT /note="Phytochrome chromophore attachment site"
FT /evidence="ECO:0000259|PROSITE:PS50046"
FT DOMAIN 518..655
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
SQ SEQUENCE 721 AA; 78728 MW; 32AD79579DBEC760 CRC64;
MPDSLQRDLD ASYDPRVLAE TAGAIQPHGC LIVVDQRWRR VTLTSANLDR FLDQTSADAL
GRPPSAVLGA VPINLLAARF GKGVAGPVTV SCRLETASQP LHVTAHGVST RIILELEPCG
DPTDNLSERV AGWSTRISGA DNPSDVLSLL RQAICELTGL ETIEVYRIDD DGELQRLTTD
EASGGRRLTC CPFPAALSHP TACLFSDTAP LRVIADTNAS PVPLAGEGAA DLDLSHAVLR
EVPADERCWL RQMEAHAALV INLHDAQRRW GLIACHGPRP RYLAPTLRHL LQLLAHTAFQ
RHALLLEREE SLRRRQFLAV AARLGTRPHR PSTASLLAAG RSCRDHFQAC GVALVYQGKA
LALGTRPHAK NLQELGALLD RCSPGTLWHS HRLSQTSLGE TLLPGGNVTG MLAAPLNSET
RPAGWLLLFR QAADSQDRQP RESAPWTSAD RQAAADLAGL LSTEITIWRT RGRCRRLHAR
NARLRRLAHV DPVAQITNRF RIEQILEAEL TIANHGGTPC SLLLLDIDHF KRINDTHGHD
TGDQILRLVA REIQAQLRGS DHLGRWGGEE FVIIAPDCDL HQATELADRL CQGLLDTSLP
PVGQVSISIG VAGWQPGTPL ANWLTEPIWQ CTGPSTRDAP AYEWPRRNAD ALRGAAFLQS
PHGGRLLNDF LVPSTGSVAT DIDIGFSHTP ASIDIRLFYR RPEVGLEEIE ITAFVRLGDM
T
//
