ID W7TKZ0_9STRA Unreviewed; 601 AA.
AC W7TKZ0;
DT 16-APR-2014, integrated into UniProtKB/TrEMBL.
DT 16-APR-2014, sequence version 1.
DT 27-MAR-2024, entry version 26.
DE SubName: Full=E3 ubiquitin-protein ligase rnf8 {ECO:0000313|EMBL:EWM26742.1};
GN ORFNames=Naga_100001g104 {ECO:0000313|EMBL:EWM26742.1};
OS Nannochloropsis gaditana.
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Eustigmatophyceae;
OC Eustigmatales; Monodopsidaceae; Nannochloropsis.
OX NCBI_TaxID=72520 {ECO:0000313|EMBL:EWM26742.1, ECO:0000313|Proteomes:UP000019335};
RN [1] {ECO:0000313|EMBL:EWM26742.1, ECO:0000313|Proteomes:UP000019335}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=B-31 {ECO:0000313|EMBL:EWM26742.1,
RC ECO:0000313|Proteomes:UP000019335};
RX PubMed=23966634; DOI=10.1093/mp/sst120;
RA Corteggiani Carpinelli E., Telatin A., Vitulo N., Forcato C., D'Angelo M.,
RA Schiavon R., Vezzi A., Giacometti G.M., Morosinotto T., Valle G.;
RT "Chromosome Scale Genome Assembly and Transcriptome Profiling of
RT Nannochloropsis gaditana in Nitrogen Depletion.";
RL Mol. Plant 7:323-335(2014).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EWM26742.1}.
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DR EMBL; AZIL01000609; EWM26742.1; -; Genomic_DNA.
DR AlphaFoldDB; W7TKZ0; -.
DR EnsemblProtists; EWM26742; EWM26742; Naga_100001g104.
DR OrthoDB; 4593171at2759; -.
DR Proteomes; UP000019335; Chromosome 8.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
DR GO; GO:0061630; F:ubiquitin protein ligase activity; IEA:InterPro.
DR GO; GO:0006301; P:postreplication repair; IEA:InterPro.
DR GO; GO:0006513; P:protein monoubiquitination; IEA:InterPro.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR039577; Rad18.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR14134; E3 UBIQUITIN-PROTEIN LIGASE RAD18; 1.
DR PANTHER; PTHR14134:SF2; E3 UBIQUITIN-PROTEIN LIGASE RAD18; 1.
DR Pfam; PF13920; zf-C3HC4_3; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Reference proteome {ECO:0000313|Proteomes:UP000019335};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT TRANSMEM 577..594
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 412..456
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT REGION 32..61
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 236..255
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 270..301
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 534..567
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 236..251
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 270..293
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 601 AA; 65837 MW; C4C05012AD4DA868 CRC64;
MARRGLSHNL PNYVKGGCTV GACTYQSQAA RTFHDDDDDD SGGVGRDSTV LTTDTTTGER
AEEVRVQSNA LKDANLSPVA TPAPHLSRDC TISAREVEEA SRILFAPEGA TSHFHHHRAE
AAYQDSEANK LQKRVSGAAK TSERAPQVEA GIDEAVEDKQ RVNLAKGMAP TQSLPPMLRT
RSPVSRSLAP LPSTLLARLH PQPEVHAEIL RFGEALASNP RIQNAIVEEL DMHYPPSRKA
FEREGTGEND EGAAERSLAQ MESAVRRLLG RTSAEDRAEA ATQEGEEGNE ERRGFGSAGG
GYSGRSSFLT DSFEVLGAMS AEWSSASSKN GGAEEKVGNE REDMAENLPS NSFVSVGRYM
RRKDSLAGEV SDEVLDELLR SEDDDDVIAQ KLFAETPDDQ VRRFLRNLDL ECVICHEYMV
EAAAVDCGEG HTFCGECIER WLELPVAGGS RCPTCQKPVH STIPMRQYDA MIEKYVRASN
LWDEQCSFYR RRTLAHMRRE MERQDREEEE TATAATQGPF AGIGNLFGLG TRANARRQRR
RSRRATAAAT RAAAGASRTT GDGGAGEAAQ PWWKSELLST ALSVATMLVL LVLFKRGFKT
R
//