ID W8CLP7_ASPOF Unreviewed; 327 AA.
AC W8CLP7;
DT 14-MAY-2014, integrated into UniProtKB/TrEMBL.
DT 14-MAY-2014, sequence version 1.
DT 27-MAR-2024, entry version 26.
DE SubName: Full=Phytochrome C {ECO:0000313|EMBL:AGH68096.1};
DE Flags: Fragment;
GN Name=phyC {ECO:0000313|EMBL:AGH68096.1};
OS Asparagus officinalis (Garden asparagus).
OG Plastid; Chloroplast {ECO:0000313|EMBL:AGH68096.1}.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Asparagaceae;
OC Asparagoideae; Asparagus.
OX NCBI_TaxID=4686 {ECO:0000313|EMBL:AGH68096.1};
RN [1] {ECO:0000313|EMBL:AGH68096.1}
RP NUCLEOTIDE SEQUENCE.
RA Xu Y.-L., He P., Zhang L., Dong S.-L., Li F.;
RL Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:AGH68096.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=26079131; DOI=10.1016/j.ympev.2015.06.002;
RA Norup M.F., Petersen G., Burrows S., Bouchenak-Khelladi Y.,
RA Leebens-Mack J., Pires J.C., Linder H.P., Seberg O.;
RT "Evolution of Asparagus L. (Asparagaceae): Out-of-South-Africa and multiple
RT origins of sexual dimorphism.";
RL Mol. Phylogenet. Evol. 92:25-44(2015).
CC -!- FUNCTION: Regulatory photoreceptor which exists in two forms that are
CC reversibly interconvertible by light: the Pr form that absorbs
CC maximally in the red region of the spectrum and the Pfr form that
CC absorbs maximally in the far-red region. Photoconversion of Pr to Pfr
CC induces an array of morphogenic responses, whereas reconversion of Pfr
CC to Pr cancels the induction of those responses. Pfr controls the
CC expression of a number of nuclear genes including those encoding the
CC small subunit of ribulose-bisphosphate carboxylase, chlorophyll A/B
CC binding protein, protochlorophyllide reductase, rRNA, etc. It also
CC controls the expression of its own gene(s) in a negative feedback
CC fashion. {ECO:0000256|ARBA:ARBA00002479}.
CC -!- SIMILARITY: Belongs to the phytochrome family.
CC {ECO:0000256|ARBA:ARBA00008235}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; JX574056; AGH68096.1; -; Genomic_DNA.
DR AlphaFoldDB; W8CLP7; -.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-KW.
DR GO; GO:0009881; F:photoreceptor activity; IEA:UniProtKB-KW.
DR GO; GO:0009584; P:detection of visible light; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR GO; GO:0007165; P:signal transduction; IEA:UniProt.
DR Gene3D; 3.30.450.270; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR016132; Phyto_chromo_attachment.
DR InterPro; IPR013516; Phyto_chromo_BS.
DR InterPro; IPR001294; Phytochrome.
DR InterPro; IPR013515; Phytochrome_cen-reg.
DR InterPro; IPR043150; Phytochrome_PHY_sf.
DR PANTHER; PTHR47876; OS08G0260000 PROTEIN; 1.
DR PANTHER; PTHR47876:SF3; PHYTOCHROME 1; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF00360; PHY; 1.
DR PRINTS; PR01033; PHYTOCHROME.
DR SMART; SM00065; GAF; 1.
DR SUPFAM; SSF55781; GAF domain-like; 2.
DR PROSITE; PS00245; PHYTOCHROME_1; 1.
DR PROSITE; PS50046; PHYTOCHROME_2; 1.
PE 3: Inferred from homology;
KW Chloroplast {ECO:0000313|EMBL:AGH68096.1};
KW Chromophore {ECO:0000256|ARBA:ARBA00022991};
KW Photoreceptor protein {ECO:0000256|ARBA:ARBA00022543};
KW Plastid {ECO:0000313|EMBL:AGH68096.1};
KW Receptor {ECO:0000256|ARBA:ARBA00023170};
KW Sensory transduction {ECO:0000256|ARBA:ARBA00022606};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 19..187
FT /note="Phytochrome chromophore attachment site"
FT /evidence="ECO:0000259|PROSITE:PS50046"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:AGH68096.1"
FT NON_TER 327
FT /evidence="ECO:0000313|EMBL:AGH68096.1"
SQ SEQUENCE 327 AA; 36484 MW; 6C6A4CF41B0187CF CRC64;
SYKLAAKAIS RLQSLPSGNI SLLCDVLVRE ISDLTGYDRV MAYKFHEDEH GEVIAECRRS
DLEPYIGLHY PATDIPQASR FLFMKSKVRM ICDCSAHPVK IIQDKKLAQP LSLCGSTLRA
PHGCHAQYMS NMGSVASLVM SVTINEDDDE SGSDQKGRKL WGLVVCHHTN PRFVPFPLRY
ACEFLLQVFG IQLNKEVELA AQAREKHILR TQTVLCDMLL RDAPIGIFTQ TPNVMDIVKC
DGAALYYKNQ IWVLGTTPTE PQIRDISAWL LECHDGSTGL STDSLMEAGY PGALALGDAV
CGMAAIKITD KDFIFWFRSH TAKEIKW
//
