ID W8CR46_PANGI Unreviewed; 160 AA.
AC W8CR46;
DT 14-MAY-2014, integrated into UniProtKB/TrEMBL.
DT 14-MAY-2014, sequence version 1.
DT 08-NOV-2023, entry version 40.
DE RecName: Full=Large ribosomal subunit protein uL22c {ECO:0000256|HAMAP-Rule:MF_01331};
GN Name=rpl22 {ECO:0000256|HAMAP-Rule:MF_01331,
GN ECO:0000313|EMBL:AGM15180.1};
GN ORFNames=DMYCP0060 {ECO:0000313|EMBL:AGM15180.1}, DMYMT_048
GN {ECO:0000313|EMBL:AHJ81029.1}, EMYCP0060
GN {ECO:0000313|EMBL:AGM15008.1}, GLSCP0060
GN {ECO:0000313|EMBL:AGM15094.1}, YSSCP0060
GN {ECO:0000313|EMBL:AGW31940.1};
OS Panax ginseng (Korean ginseng).
OG Plastid; Chloroplast {ECO:0000313|EMBL:AGM15180.1}.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Apiales; Araliaceae; Panax.
OX NCBI_TaxID=4054 {ECO:0000313|EMBL:AGM15180.1};
RN [1] {ECO:0000313|EMBL:AHJ81029.1}
RP NUCLEOTIDE SEQUENCE.
RA Zhao Y., Xiao J., Yu J.;
RT "The complete mitochondrion genome sequence of Panax Ginseng(Panax Ginseng
RT damaya).";
RL Submitted (OCT-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:AGM15180.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Damaya {ECO:0000313|EMBL:AGM15180.1}, Ermaya
RC {ECO:0000313|EMBL:AGM15008.1}, and Gaolishen
RC {ECO:0000313|EMBL:AGM15094.1};
RX PubMed=25642231; DOI=10.3389/fpls.2014.00696;
RA Zhao Y., Yin J., Guo H., Zhang Y., Xiao W., Sun C., Wu J., Qu X., Yu J.,
RA Wang X., Xiao J.;
RT "The complete chloroplast genome provides insight into the evolution and
RT polymorphism of Panax ginseng.";
RL Front. Plant Sci. 5:696-696(2014).
RN [3] {ECO:0000313|EMBL:AIX97928.1}
RP NUCLEOTIDE SEQUENCE.
RA Kim K.-H., Yang T.-J.;
RL Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:AJC99612.1}
RP NUCLEOTIDE SEQUENCE.
RA Kim K.-H., Lee J.-K., Yang K.-W., Lee S.-C., Yang T.-J.;
RL Submitted (JUL-2014) to the EMBL/GenBank/DDBJ databases.
RN [5] {ECO:0000313|EMBL:AIX97928.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=26061692;
RA Kim K., Lee S.C., Lee J., Lee H.O., Joh H.J., Kim N.H., Park H.S.,
RA Yang T.J.;
RT "Comprehensive Survey of Genetic Diversity in Chloroplast Genomes and 45S
RT nrDNAs within Panax ginseng Species.";
RL PLoS ONE 10:E0117159-E0117159(2015).
RN [6] {ECO:0000313|EMBL:QDJ96008.1}
RP NUCLEOTIDE SEQUENCE.
RA Wang K., Li L., Zhao M., Li S., Sun H., Zhang M., Wang Y.;
RT "Characterization of the complete chloroplast genome of Jilin ginseng
RT (Panax ginseng C. A. Meyer) using next generation sequencing.";
RL Mitochondrial DNA Part B Resour 3:685-686(2018).
RN [7] {ECO:0000313|EMBL:QDI97148.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=JYH-2016473 {ECO:0000313|EMBL:QDI97148.1};
RA Liu C., Ji Y.;
RT "Evaluating the discriminatory power of whole plastomes and nuclear
RT ribosomal DNA sequences in Panax (Araliaceae).";
RL Submitted (JAN-2019) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: The globular domain of the protein is located near the
CC polypeptide exit tunnel on the outside of the subunit, while an
CC extended beta-hairpin is found that lines the wall of the exit tunnel
CC in the center of the 70S ribosome. {ECO:0000256|ARBA:ARBA00003478,
CC ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004009}.
CC -!- FUNCTION: This protein binds specifically to 23S rRNA.
CC {ECO:0000256|ARBA:ARBA00003611, ECO:0000256|HAMAP-Rule:MF_01331,
CC ECO:0000256|RuleBase:RU004009}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit.
CC {ECO:0000256|ARBA:ARBA00011838, ECO:0000256|HAMAP-Rule:MF_01331}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast {ECO:0000256|HAMAP-
CC Rule:MF_01331, ECO:0000256|RuleBase:RU004009}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL22 family.
CC {ECO:0000256|ARBA:ARBA00009451, ECO:0000256|HAMAP-Rule:MF_01331,
CC ECO:0000256|RuleBase:RU004005}.
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DR EMBL; KC686332; AGM15008.1; -; Genomic_DNA.
DR EMBL; KC686333; AGM15094.1; -; Genomic_DNA.
DR EMBL; KC686331; AGM15180.1; -; Genomic_DNA.
DR EMBL; KF431956; AGW31940.1; -; Genomic_DNA.
DR EMBL; KF735063; AHJ81029.1; -; Genomic_DNA.
DR EMBL; KM067386; AIX97928.1; -; Genomic_DNA.
DR EMBL; KM067387; AIX98015.1; -; Genomic_DNA.
DR EMBL; KM067388; AIX98098.1; -; Genomic_DNA.
DR EMBL; KM067389; AIX98183.1; -; Genomic_DNA.
DR EMBL; KM067390; AIX98268.1; -; Genomic_DNA.
DR EMBL; KM067391; AIX98353.1; -; Genomic_DNA.
DR EMBL; KM067392; AIX98438.1; -; Genomic_DNA.
DR EMBL; KM067393; AIX98523.1; -; Genomic_DNA.
DR EMBL; KM067394; AIX98608.1; -; Genomic_DNA.
DR EMBL; KM088019; AJC99612.1; -; Genomic_DNA.
DR EMBL; KM088020; AJC99697.1; -; Genomic_DNA.
DR EMBL; MK408938; QDI97148.1; -; Genomic_DNA.
DR EMBL; MH049735; QDJ96008.1; -; Genomic_DNA.
DR RefSeq; YP_087005.1; NC_006290.1.
DR AlphaFoldDB; W8CR46; -.
DR SMR; W8CR46; -.
DR GeneID; 3021456; -.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0015934; C:large ribosomal subunit; IEA:InterPro.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR CDD; cd00336; Ribosomal_L22; 1.
DR Gene3D; 3.90.470.10; Ribosomal protein L22/L17; 1.
DR HAMAP; MF_01331_B; Ribosomal_L22_B; 1.
DR InterPro; IPR001063; Ribosomal_uL22.
DR InterPro; IPR005727; Ribosomal_uL22_bac/chlpt-type.
DR InterPro; IPR047867; Ribosomal_uL22_bac/org-type.
DR InterPro; IPR018260; Ribosomal_uL22_CS.
DR InterPro; IPR036394; Ribosomal_uL22_sf.
DR NCBIfam; TIGR01044; rplV_bact; 1.
DR PANTHER; PTHR13501:SF10; 50S RIBOSOMAL PROTEIN L22, CHLOROPLASTIC; 1.
DR PANTHER; PTHR13501; CHLOROPLAST 50S RIBOSOMAL PROTEIN L22-RELATED; 1.
DR Pfam; PF00237; Ribosomal_L22; 1.
DR SUPFAM; SSF54843; Ribosomal protein L22; 1.
DR PROSITE; PS00464; RIBOSOMAL_L22; 1.
PE 3: Inferred from homology;
KW Chloroplast {ECO:0000313|EMBL:AGM15180.1};
KW Mitochondrion {ECO:0000313|EMBL:AHJ81029.1};
KW Plastid {ECO:0000313|EMBL:AGM15180.1};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274, ECO:0000256|HAMAP-
KW Rule:MF_01331};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980, ECO:0000256|HAMAP-
KW Rule:MF_01331};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|HAMAP-
KW Rule:MF_01331};
KW rRNA-binding {ECO:0000256|ARBA:ARBA00022730, ECO:0000256|HAMAP-
KW Rule:MF_01331}.
SQ SEQUENCE 160 AA; 18494 MW; D3E70184702F724C CRC64;
MLKKRKTTVY ALGQYLSMSA HKARRVIDQI RGRSYEETLM ILELMPYRAC YPIFKLVYSA
AANASYNMDS NESNLVISKA EVSEGTIVKK LKPRARGRSF PIKRPTCHIS IVVKDISLDE
YIEVDFLDPL RWSKKLKSKK KYTAMAYHNM YSNGGVWDKK
//
