ID   W9RC41_9ROSA            Unreviewed;       977 AA.
AC   W9RC41;
DT   14-MAY-2014, integrated into UniProtKB/TrEMBL.
DT   14-MAY-2014, sequence version 1.
DT   27-MAR-2024, entry version 40.
DE   RecName: Full=Vacuolar protein sorting-associated protein 41 homolog {ECO:0000256|PIRNR:PIRNR028921};
GN   ORFNames=L484_014073 {ECO:0000313|EMBL:EXB81589.1};
OS   Morus notabilis.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Rosales; Moraceae; Moreae; Morus.
OX   NCBI_TaxID=981085 {ECO:0000313|EMBL:EXB81589.1, ECO:0000313|Proteomes:UP000030645};
RN   [1] {ECO:0000313|Proteomes:UP000030645}
RP   NUCLEOTIDE SEQUENCE.
RA   He N., Zhao S.;
RT   "Draft Genome Sequence of a Mulberry Tree, Morus notabilis C.K. Schneid.";
RL   Submitted (JAN-2013) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Required for vacuolar assembly and vacuolar traffic.
CC       {ECO:0000256|PIRNR:PIRNR028921}.
CC   -!- SIMILARITY: Belongs to the VPS41 family.
CC       {ECO:0000256|ARBA:ARBA00009582, ECO:0000256|PIRNR:PIRNR028921}.
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DR   EMBL; KE344847; EXB81589.1; -; Genomic_DNA.
DR   RefSeq; XP_010100138.1; XM_010101836.1.
DR   AlphaFoldDB; W9RC41; -.
DR   STRING; 981085.W9RC41; -.
DR   eggNOG; KOG2066; Eukaryota.
DR   Proteomes; UP000030645; Unassembled WGS sequence.
DR   GO; GO:0030897; C:HOPS complex; IEA:UniProtKB-UniRule.
DR   GO; GO:0005770; C:late endosome; IEA:UniProtKB-UniRule.
DR   GO; GO:0034058; P:endosomal vesicle fusion; IEA:UniProtKB-UniRule.
DR   GO; GO:0006886; P:intracellular protein transport; IEA:UniProtKB-UniRule.
DR   GO; GO:0006623; P:protein targeting to vacuole; IEA:InterPro.
DR   GO; GO:0007034; P:vacuolar transport; IEA:UniProtKB-UniRule.
DR   CDD; cd16687; RING-H2_Vps8; 1.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR   Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR   InterPro; IPR000547; Clathrin_H-chain/VPS_repeat.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   InterPro; IPR016902; VPS41.
DR   InterPro; IPR045111; Vps41/Vps8.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   InterPro; IPR036322; WD40_repeat_dom_sf.
DR   InterPro; IPR001680; WD40_rpt.
DR   PANTHER; PTHR12616; VACUOLAR PROTEIN SORTING VPS41; 1.
DR   PANTHER; PTHR12616:SF1; VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 41 HOMOLOG; 1.
DR   Pfam; PF00637; Clathrin; 1.
DR   PIRSF; PIRSF028921; VPS41; 2.
DR   SMART; SM00299; CLH; 1.
DR   SMART; SM00320; WD40; 2.
DR   SUPFAM; SSF50978; WD40 repeat-like; 1.
DR   PROSITE; PS50236; CHCR; 1.
PE   3: Inferred from homology;
KW   Protein transport {ECO:0000256|PIRNR:PIRNR028921};
KW   Reference proteome {ECO:0000313|Proteomes:UP000030645};
KW   Transport {ECO:0000256|PIRNR:PIRNR028921}.
FT   REGION          1..42
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        11..38
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   977 AA;  110244 MW;  95F32DB9A6FEF91D CRC64;
     MAPIPSENGV EGDDEREEEE DEEEEEEEEE EDEEEEEEEP RLKYQRLGGS ISLLLATDAA
     SCVAVAERMI ALGTQGGTVH ILDFLGNQVK EFNVHTAAVN DLGFDMEGEY IGSCSDDGSV
     VINSLFTDEN MKFEYHRPMK AIALDPDYSK KTSRRFVAGG LAGHLYFNSK KWLGFRDQVL
     HSGEGPIHAV KWRGNLIAWA NDAGVKVYDA ANDQRITFIE RPRGSPRPEI LLPHLVWQDD
     TLLVIGWGTS VKIAAIRTNQ QRATNGTYKL VPLSSMNQVD IVASFQTSYH ISGIAPFGDS
     LVVLAYIPGE EDREKDFSSS ITSRQGNAQR PEVRIVSWNN DELSTDALPV HGFEHYKAKD
     YSLAHAPFSG SSYAGGQWAA GDEPLYYIVS PKDVVIAKPR DAEDHIAWLL EHGWHEKALA
     AVEAGQGRSE LLDEVGSRYL DHLIVERKYA EAASLCPKLL QGSASAWERW VFHFAQLRQL
     PVLVPYIPTE NPRLRDTAYE VALVALATNP SFHKDLLSTV KSWPSVLYSA LPVISAIEPQ
     LNTSSMTDAL KEALAELYVI DGQFEKAFSL YADLMKPDIF DFIEKHNLHD SIREKVVQLM
     MLDCKRAVSL LLQHKDLITP SEVVAQLLNA RIKCDLRYFL HLYLHSLFEV NPHAGKDYHD
     MQVELYADYD PKMMLPFLRS SQHYTLEKAY EICVKRDLLR EQVFILGRMG NAKQALAVII
     NQLGDIEEVE PHLLILEMFS IEVDFYFAVY FEAVEFVTMQ HDDELWEELI KQCLYKPEMV
     GMLLEHTVGN LDPLYIVNMV PNGLEIPRLR DRLVKIITDY RTETSLRHGC NAILKADCVN
     LLVKYYNEAK HGIYLSNEEN EARGIRNDSR APQAIEKSLS IRNMSVKSKT RGGGRCCMCF
     DPFSIRGVSV IVFFCCHAYH TTCLMDSTYT SANKASGTTR DQVSEYEYDN GYDDNDDDDA
     ESGTPRMRCI LCTTAAS
//