ID W9RID7_9ROSA Unreviewed; 541 AA.
AC W9RID7;
DT 14-MAY-2014, integrated into UniProtKB/TrEMBL.
DT 14-MAY-2014, sequence version 1.
DT 24-JAN-2024, entry version 34.
DE SubName: Full=Transcription initiation factor TFIID subunit 6 {ECO:0000313|EMBL:EXB78675.1};
GN ORFNames=L484_004040 {ECO:0000313|EMBL:EXB78675.1};
OS Morus notabilis.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Rosales; Moraceae; Moreae; Morus.
OX NCBI_TaxID=981085 {ECO:0000313|EMBL:EXB78675.1, ECO:0000313|Proteomes:UP000030645};
RN [1] {ECO:0000313|Proteomes:UP000030645}
RP NUCLEOTIDE SEQUENCE.
RA He N., Zhao S.;
RT "Draft Genome Sequence of a Mulberry Tree, Morus notabilis C.K. Schneid.";
RL Submitted (JAN-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the TAF6 family.
CC {ECO:0000256|ARBA:ARBA00007688}.
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DR EMBL; KE344775; EXB78675.1; -; Genomic_DNA.
DR RefSeq; XP_010099474.1; XM_010101172.1.
DR AlphaFoldDB; W9RID7; -.
DR STRING; 981085.W9RID7; -.
DR GeneID; 21387548; -.
DR KEGG; mnt:21387548; -.
DR eggNOG; KOG2549; Eukaryota.
DR OrthoDB; 1529at2759; -.
DR Proteomes; UP000030645; Unassembled WGS sequence.
DR GO; GO:0000124; C:SAGA complex; IEA:InterPro.
DR GO; GO:0046695; C:SLIK (SAGA-like) complex; IEA:InterPro.
DR GO; GO:0005669; C:transcription factor TFIID complex; IEA:InterPro.
DR GO; GO:0046982; F:protein heterodimerization activity; IEA:InterPro.
DR GO; GO:0016251; F:RNA polymerase II general transcription initiation factor activity; IEA:InterPro.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006367; P:transcription initiation at RNA polymerase II promoter; IEA:InterPro.
DR CDD; cd08050; TAF6C; 1.
DR Gene3D; 1.10.20.10; Histone, subunit A; 1.
DR Gene3D; 1.25.40.770; TAF6, C-terminal HEAT repeat domain; 1.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR009072; Histone-fold.
DR InterPro; IPR037796; TAF6.
DR InterPro; IPR011442; TAF6_C.
DR InterPro; IPR046344; TAF6_C_sf.
DR InterPro; IPR004823; TAF_TATA-bd_Histone-like_dom.
DR PANTHER; PTHR10221; TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6; 1.
DR PANTHER; PTHR10221:SF13; TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6; 1.
DR Pfam; PF02969; TAF; 1.
DR Pfam; PF07571; TAF6_C; 1.
DR SMART; SM00803; TAF; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
DR SUPFAM; SSF47113; Histone-fold; 1.
PE 3: Inferred from homology;
KW Initiation factor {ECO:0000313|EMBL:EXB78675.1};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Protein biosynthesis {ECO:0000313|EMBL:EXB78675.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000030645};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 2..68
FT /note="TATA box binding protein associated factor (TAF)
FT histone-like fold"
FT /evidence="ECO:0000259|SMART:SM00803"
FT REGION 418..485
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 442..485
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 541 AA; 60373 MW; 80DD73D18A0834AA CRC64;
MSIVPKESIE VIAQSIGINN LSSDVALSLA PDVEYRLREI MQEAVKCMRH SRRTRMTVDD
VDAALDLRNV EPVYGFASGG RLRFKRAVGH RDLFYIDDKD VDFKDVIEAP LPKVPLDTAV
FVHWLAIEGV QPAIPENAPV EVIAAPFDSK KDEQKDDVPV DIKLPVKHVL SRELQLYFDR
ITELVVSKSD SVLFKEALVS LSTDSGLHPL VPYFSCFIAD EVARGLNDFH LLFALMRVVW
SLLQNPNIHI EPYLHQLMPS VVTCLVAKRL GNRFSDNHWQ LRDFTANLVA SICKRFGHVY
NTLQTRLTKT LVNAFLDPKR ALTQHYGAIQ GLTALGPNVV RLLILPNLKP YLQLLEPELL
LSRQKNEMKR YEAWRVYGAL LRAAGNCIYD RLKIFPPLQS PVPHPIWKAN AGVATITPNK
RKAIMDDTEQ QPPLKRMEID GPTSVPSSNS SPSHLPGETS AISNSGDTNA GPSSPSSSQM
PAEIVSDTKS KGNCKYLKTS AILTQVWKDD LNSGHLLVSL FELFGESILS FIPAPEMSLF
I
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